Pairwise Alignments

Query, 716 a.a., Ribonuclease R from Azospirillum sp. SherDot2

Subject, 813 a.a., ribonuclease R from Escherichia coli ECRC100

 Score =  402 bits (1034), Expect = e-116
 Identities = 267/708 (37%), Positives = 368/708 (51%), Gaps = 34/708 (4%)

Query: 7   PSKDAILAFIRSSTTPVGKREIARAFKLSGSADRETLKDLLRELEADGTVERGRNKRMAP 66
           PS++ IL  +     P  + E+A    + G    E L+  LR +E DG +   R +  A 
Sbjct: 19  PSREFILEHLTKCEKPASRDELAVELHIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYAL 78

Query: 67  PQALPAVAVLLVTGADADGELAARPLTWTGEGNPPRIFLLPEKKSRGEEKPLAVGDTLLA 126
           P+ L  V   ++   D  G L         EG    ++L  E+      K    GD +LA
Sbjct: 79  PERLDLVKGTVIGHRDGYGFLRV-------EGRKDDLYLSSEQM-----KTCIHGDQVLA 126

Query: 127 K-LARINDRLYEARVIRRIDGEREGRILGVYRPSADGGRILPTDRRHKTEFLVLPPNRGD 185
           + L        EAR++R +   +  +I+G Y   A  G ++P D R   + L+ P     
Sbjct: 127 QPLGADRKGRREARIVRVLV-PKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPPDQIMG 185

Query: 186 AEPGDLVFADILPAG-RAGQPQARVVERLGSTDEPRAFSLIAIHAHGIPTVFPHAALREA 244
           A  G +V  ++     R  +   ++VE LG          IA+  H IP ++P A  ++ 
Sbjct: 186 ARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQAVEQQV 245

Query: 245 ----ELAAVPAQMQREDLRDIPLVTIDGADARDFDDAVWAEADGDPENPDGWHLIVAIAD 300
               E     A+  R DLRD+PLVTIDG DARDFDDAV+ E     +   GW L VAIAD
Sbjct: 246 AGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCEK----KRGGGWRLWVAIAD 301

Query: 301 VSYYVRPGSALDRTAYERGNSVYFPDRVVPMLPEALSNGLCSLRPGEDRACLAFHLWIDR 360
           VSYYVRP + LDR A  RG SVYFP +V+PMLPE LSNGLCSL P  DR C+   + +  
Sbjct: 302 VSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSS 361

Query: 361 SGVLIRHRLVRGLMRSVARLIYEQVQDCHDGRPD--EVTGPLADGVIAPLFGAYARLAAA 418
            G L  ++    +M S ARL Y +V     G  D  E   PL    +  L   Y  L  A
Sbjct: 362 KGRLTGYKFYEAVMSSHARLTYTKVWHILQGDQDLREQYAPLVKH-LEELHNLYKVLDKA 420

Query: 419 RAKRGTLELDLPERRVHIDERGRVAEIVRRERHDSHRLIEEFMIAANVAAAEVLERRTMP 478
           R +RG +  +  E +   +   R+  I + +R+D+H+LIEE MI AN++AA  +E+   P
Sbjct: 421 REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEP 480

Query: 479 GLYRIHDRPSMEKMEALRGFLAGIGHPLTKSADLTPDHFTRILRKVEGTSHATLVSEVVL 538
            L+RIHD+PS E + + R  LA +G  L       P  +  +L  V     A ++  ++L
Sbjct: 481 ALFRIHDKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVADRPDAEMLQTMLL 540

Query: 539 RAQAQAAYSPDNIGHFGLALHRYAHFTSPIRRYADLIVHRALIRTLGLGVG--GLDDETL 596
           R+  QA Y P+N GHFGLAL  YAHFTSPIRRY DL++HRA+   L    G  G   ET 
Sbjct: 541 RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLMLHRAIKYLLAKEQGHQGNTTETG 600

Query: 597 G------RLAEIGDHLSSTERRAATAERDAVDRYTAAFLADRIGDRFSGRISGVSRFGLF 650
           G       + ++G H S  ERRA  A RD  D     F+ D++G+ F G IS V+ FG F
Sbjct: 601 GYHYSMEEMLQLGQHCSMAERRADEATRDVSDWLKCDFMLDQVGNVFKGVISSVTGFGFF 660

Query: 651 VRLDESGADGLVPASSLPDDRYDHDEAAHALVGQRTGRTYRLSSPVKV 698
           VRLD+   DGLV  SSL +D Y  D+    L+G+ +G+TYRL   V+V
Sbjct: 661 VRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEV 708