Pairwise Alignments

Query, 355 a.a., Ribosomal large subunit pseudouridine synthase C from Azospirillum sp. SherDot2

Subject, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Pectobacterium carotovorum WPP14

 Score =  158 bits (400), Expect = 2e-43
 Identities = 109/312 (34%), Positives = 164/312 (52%), Gaps = 13/312 (4%)

Query: 20  KSDS-KVETRIVTADEADMRLDRWFKRHFPDVNHSYLQKLLRTGQVRVDGKRAETSTRLA 78
           K+D+  V+   ++ADEA  R+D +   H   V  S + ++LR G+VR++ KR +   +L 
Sbjct: 2   KTDNPSVQFVTISADEAGQRVDNFLHTHLKGVPKSMVYRILRKGEVRINKKRVKPEYKLL 61

Query: 79  AKQSLRIPPLAAWAAPVRGPGQGSSKPKAMSDKQIAELQALVLYRDADVIAINKPAGLAV 138
               +RIPP+           +    P + S  ++A L   ++Y D  ++ +NKP+G AV
Sbjct: 62  DGDVIRIPPVRQ--------AERDETPVSASLGKVAALAECIIYEDDYLLVLNKPSGTAV 113

Query: 139 QGGTGTSKHLDAMLDALRFDGNERPKLVHRLDKDTSGVLLLARTTFAASKLTELFRGSAV 198
            GG+G S  +   L ALR +     +LVHRLD+DTSGVLL+A+   A   L E  R   +
Sbjct: 114 HGGSGLSFGVIEGLRALRPEARFL-ELVHRLDRDTSGVLLVAKKRSALRSLHEQLRLKGM 172

Query: 199 RKIYWAVTVGVPTPYQGKIDLALAKEGGPHGERVAENKEEGKRALTVYSVQENVGKQAAF 258
           +K Y A+  G    +   +   L K     GER+     +GK++ T + ++E   + A  
Sbjct: 173 QKDYLALVRGQWQSHCKVVQAPLLKNILQSGERIVRVNSDGKQSETRFKIEERF-EHATL 231

Query: 259 VAMWPLTGRTHQLRVHMAAVGTPILGDGKYAGQGAFLAGGAEVA-KKLHLHARRLILPHP 317
           V   P+TGRTHQ+RVH    G PI  D +Y G   F    A+   K+L LHA+ L   HP
Sbjct: 232 VRASPVTGRTHQIRVHAQHAGHPIAFDDRY-GDREFDQQLADTGLKRLFLHAQALRFEHP 290

Query: 318 RGGKTIDVTAPL 329
             G+T+ V APL
Sbjct: 291 NTGETLRVEAPL 302