Pairwise Alignments

Query, 573 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  330 bits (847), Expect = 5e-95
 Identities = 196/372 (52%), Positives = 252/372 (67%), Gaps = 6/372 (1%)

Query: 201 LVVIAG-GLIGLVACLGTAIMMTRGVTRPLSAMTDAMHRLAEGDSTVIVPAEGRSDEIGA 259
           L+ +AG GLIG +A L    +  R +  P+ AM  AM +L + D  V +P  G ++EIG 
Sbjct: 14  LITVAGIGLIGAMASL----IGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIGR 69

Query: 260 MASALVVFKGNAIEKRRLEEEQRNADLRAEEERIQAMRQLADRLEQRIGGILRTVAGEAR 319
           MAS+L VF+   +E  RL  E   A+L    ER +AM  LA   ++ + G+L  V+G A 
Sbjct: 70  MASSLAVFRDAMVETERLTAEHE-AELTERVERGRAMDSLARDFDRTVSGVLEVVSGAAT 128

Query: 320 VLQQAAKMMTDTADQTNLRSEAVAAATQQTSASVETVAAAAEELSASVGEIGRQVSQSTG 379
            L   A+ M   A+QT  ++ AVAAA ++ S+SVETVA AAEELSAS+ EI RQV+QS+ 
Sbjct: 129 ELHATAQGMQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSST 188

Query: 380 IAEEAVERARHANTKVDGLAAAARQVGDVVQLINSIASQTNLLALNATIEAARAGEAGKG 439
            A++A + AR  NT V GLAA++ ++GDVV LIN IA+QTNLLALNATIEAARAGEAGKG
Sbjct: 189 AAQQASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKG 248

Query: 440 FAVVASEVKNLANQTAKATEEISAQITAIQAATGEAVSDIQGITRVIESMNDIATGIAGA 499
           FAVVA EVK LANQT KATEEIS Q+ A+Q AT EAV+ I  I   IE +N IAT I+ A
Sbjct: 249 FAVVAGEVKALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAA 308

Query: 500 VSQQAAATGEIARNAQQASTGTRDVNHNITGVSAAAGETGTAAKNVLNASTTLSQEAVAM 559
           V +Q+AAT EIARN  QAS GTR V+ N+ GVSA A ET  AA  VL+A+ +LS+EA  +
Sbjct: 309 VEEQSAATAEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATEL 368

Query: 560 ERQLAEFLAQLR 571
           +  +  FL  +R
Sbjct: 369 KDVVDRFLEGVR 380