Pairwise Alignments

Query, 315 a.a., D-alanine--D-alanine ligase B from Azospirillum sp. SherDot2

Subject, 306 a.a., D-alanine--D-alanine ligase from Methylophilus sp. DMC18

 Score =  189 bits (480), Expect = 7e-53
 Identities = 120/295 (40%), Positives = 160/295 (54%), Gaps = 14/295 (4%)

Query: 13  VAVLMGGWSAEREVSLVSGAGVAKALEEEGYRVTAID-VQRDLGGLMHALSTPRPDVVFN 71
           VAVL GG S EREVSL SG+ V  AL+ +G    A D   +DL  L         D  F 
Sbjct: 11  VAVLFGGRSGEREVSLKSGSAVLAALQRQGVDAHAFDPASQDLSALKQF------DRAFI 64

Query: 72  ALHGRGGEDGTIQGVLEFLGLPYTHSGVQAAAISMDKAMTKRVLDTVGVRSPKGMVL-SR 130
           ALHGR GEDGTIQG LE +G+PYT SGV A+A+ MDK  TK +    GV +P  +++  R
Sbjct: 65  ALHGRFGEDGTIQGALELMGIPYTGSGVMASALGMDKWRTKLLWTAAGVTTPNYVLMDDR 124

Query: 131 GEITGGSHPMPAPYIVKPVDEGSTVGVTLVREGQNSPVGDAWTFGERALI--EEFIPGRE 188
             +      +  P  VKP +EGS++GV+ V++  +     A       L+  E+F+ G E
Sbjct: 125 THVENVVTALGLPLFVKPANEGSSIGVSKVKQAGDLQAAYALAKQSDPLVIAEQFVGGGE 184

Query: 189 LTVGVMGDRALAVTEIVFQAQLYDYTAKYSAGHAVHTVPAAIPEVVADEAKRLAVLAHNT 248
            TVG++G+ AL V  IV + + YDY AKY      +  P  +      + +  AV A   
Sbjct: 185 YTVGILGETALPVVRIVPKNEYYDYEAKYLRDDTEYRCPCGLSAEQEQQIQAEAVQAFKV 244

Query: 249 LGCRGVSRSDFRWDDSRPGTDGLYFLEINNQPGMTPLSLVPEQAAHVGITYGALV 303
           LGC+G  R DF  D++       YFLE+N  PGMT  SLVP  A   G+ + ALV
Sbjct: 245 LGCKGWGRVDFLMDEAGKH----YFLEVNTSPGMTDHSLVPMAAKAAGMDFDALV 295