Pairwise Alignments

Query, 473 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Azospirillum sp. SherDot2

Subject, 448 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Pseudomonas sp. S08-1

 Score =  196 bits (498), Expect = 1e-54
 Identities = 159/457 (34%), Positives = 219/457 (47%), Gaps = 44/457 (9%)

Query: 14  VMGLGKSGLATARALRDSGAEVRVWDD--NPASRAAAEAEGFAVVDLASADLS-----DL 66
           V+GLGKSG++  R L   G    V D   NP   A  + + +  V++   +L        
Sbjct: 12  VVGLGKSGMSLVRFLAQQGVRFAVADTRANPPELATLQRD-YPQVEVRCGELDVDFLCRA 70

Query: 67  TTIVWSPGIPHTHPKPHPVAERARALGIELICDIELLGRAERDCAFIGITGTNGKSTTTT 126
           + +  SPG+    P        A A G+++  DI+L  R  +    + ITG+N KST TT
Sbjct: 71  SELYVSPGLALATP----ALREAAARGVKMSGDIDLFTRHAK-APIVAITGSNAKSTVTT 125

Query: 127 LIGHILAAAGRKAAVGGNLGTPVLTF--DPIGSGGTCVLEMSSYQLELTHSITFDIAVLL 184
           L+G + AAAGRK AVGGN+GTP L    D +      VLE+SS+QLE T  +  ++A  L
Sbjct: 126 LVGEMAAAAGRKVAVGGNIGTPALDLLNDDV---ELYVLELSSFQLETTERLNAEVATCL 182

Query: 185 NITPDHLARHGGMEGYIAAKRLIFHRQTWPRTAVIGVDDEHCRKIHADLVAAGDQRIWPI 244
           N++ DH+ R+ GM+ Y  AK  IF      R  V+  DD   R + AD V       W  
Sbjct: 183 NVSEDHMDRYDGMQHYHLAKHRIFR---GARQVVVNRDDALSRPLIADQVPC-----WNF 234

Query: 245 SAQGPVAGGVYAADGWLVDDTDGEAAKVVEL---SGLPSLLGAHNWQNAAAAFATCKAAG 301
               P     +   G + ++ + + A   E    +    + GAHN  NA AA A   A G
Sbjct: 235 GLGKP----DFKRFGLVEENGEKQLAFQFETLMPTAELKIRGAHNQSNALAALALGHAVG 290

Query: 302 LPVPAIVAAMATFPGLAHRQQLVGTASGVRFVNDSKATNADATEKALATF-----DPIYW 356
           LP  A++  +  F GL HR Q V    GV + +DSKATN  A   A+          +  
Sbjct: 291 LPFEAMLQTLRNFAGLPHRCQWVRELRGVGYYDDSKATNVGAALAAIEGLGADIAGKLVL 350

Query: 357 ILGGQAKDTGLNGLEGYMGR-VRHAFLIGEAQEQFAAWLDAHGVAYTRCGTLDVATAKAA 415
           I GG  K    + L+  + +  R   L+G   E  A  L        R  TLD A  +AA
Sbjct: 351 IAGGDGKGADFSALKAPVAKFCRAVVLLGRDAELLATAL-GDAAPLVRVKTLDEAVQRAA 409

Query: 416 GLALAERLEGACVLLSPACASWDQFASFEKRGEAFAV 452
            LA +    G  VLLSPACAS D F +FE+RG  FA+
Sbjct: 410 ELAQS----GDAVLLSPACASLDMFKNFEERGRLFAL 442