Pairwise Alignments

Query, 498 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Azospirillum sp. SherDot2

Subject, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pectobacterium carotovorum WPP14

 Score =  202 bits (515), Expect = 2e-56
 Identities = 147/439 (33%), Positives = 217/439 (49%), Gaps = 23/439 (5%)

Query: 32  VAIDSRKVAAGDLFVAIRGPNFDGHAFIGAALAAGAAAAMVDHLPDGIPEGAPLLIAPSD 91
           V+ D+RK+++G LFVA++G  FD H +   A+  GAAA +V      + +   LL+  SD
Sbjct: 27  VSTDTRKLSSGCLFVALKGEKFDAHDYAADAVKGGAAALLVSKRL--LVDEPQLLV--SD 82

Query: 92  TLESMAALGVVARARCGARFVGVTGSVGKTGTKETLRHVLSAQGATYANEGSLNNHWGVP 151
           T  ++  L    R +  AR V +TGS GKT  KE    +L   G+     G+ NN  GVP
Sbjct: 83  TRVALGQLAAWVRQQSTARVVALTGSSGKTSVKEMTAAILRQCGSVLYTAGNFNNDIGVP 142

Query: 152 LSLARLPADSRYGVFELGMNHAGELGPLSRQVRPHVAIVTTIEAVHLEFFSGVEAIADAK 211
           L+L RL A+ ++ V ELG NH GE+   +  VRP  A+V  + A HLE F  +  +A AK
Sbjct: 143 LTLLRLTAEHQFAVIELGANHIGEIAYTTDLVRPESALVNNLAAAHLEGFGSLAGVAQAK 202

Query: 212 AEIFEGMDAGGIAVLNRDNGQYARLAAAARRQGLTDIWSFGAHEEADARLV--DCSLHAT 269
            EIF G+   G+A++N D+  +         +    +W F      D      D  + A 
Sbjct: 203 GEIFAGLPVDGVAIVNADSNDFPHWQVMFNHK---TVWRFSPQAACDIDFFASDVDVLAQ 259

Query: 270 CSAVTAMIRGERVQYCLSQPGRHWVMNSLAVLLAVKALGADVASAARSLSSLPPVKGRGT 329
            +  T      + Q  L  PGRH + N+LA      ++GA + +    LS L  V GR  
Sbjct: 260 GTRFTLHTPFGKTQVLLPLPGRHNISNALAAAALAMSVGATLEAVKAGLSQLQAVPGR-- 317

Query: 330 RKRIQLPQGAFTLIDESYNASPAAMAATLEVLGKIDPGAGGRRIAVLGDMRELGERADAL 389
              I L +G   L+D+SYNA+  +M A  +VL  +     G R+ V+GDM ELG+ A   
Sbjct: 318 LFPIALSEGKL-LLDDSYNANVGSMTAAAQVLADMP----GYRVMVVGDMGELGDEAPEC 372

Query: 390 HIGLAEPLRAANVDAVYACGPHMKTLFDRL-PAAMRGAWTETSVELAPIVTGTVKGGDVI 448
           H  + E  RAA +D V + G    TL + +  A+  G   +    L   +   +   +VI
Sbjct: 373 HRQVGEAARAAGIDRVLSVG----TLSELIGTASGNGEHFQDKAALVSRLKVLMSEHNVI 428

Query: 449 --MVKGSLGSRTGLIVDAL 465
             +VKGS  +    +V AL
Sbjct: 429 SVLVKGSRSAAMEQVVHAL 447