Pairwise Alignments

Query, 443 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 298 a.a., Ribosomal large subunit pseudouridine synthase B from Alteromonas macleodii MIT1002

 Score =  164 bits (414), Expect = 5e-45
 Identities = 106/234 (45%), Positives = 139/234 (59%), Gaps = 12/234 (5%)

Query: 18  ERIAKRLARAGLCSRRDAERWIAEGRVAVNSRVLDSPACVVRPGDIVQVDGKVIP---EP 74
           E++ K LA  GL SRR+ ERWI EGRV+V+         V     I +VDG ++    E 
Sbjct: 3   EKLQKVLANQGLGSRREMERWIEEGRVSVDGTKATLGDRVDHTAQI-RVDGHLLSRQTEQ 61

Query: 75  EPARLWRYHKPSGLVTTARDEKGRETVFDRLPP-DLPRVVSIGRLDLTTEGLLLLTNDGE 133
              R+  Y+KP G + +  D +GR+TVFDRLP   L R +++GRLD+ T GLLL TNDGE
Sbjct: 62  PICRVLMYNKPEGELCSRHDPEGRDTVFDRLPAIRLGRWITVGRLDMNTSGLLLFTNDGE 121

Query: 134 LARFLELPATGWTRRYRVRVFGEVDERQLAALEKGPTIEG--VKYGPIEAALD----RIQ 187
           LA  L  P     R Y VRVFGEV  + L  L+KG  +E    K+  I  A        +
Sbjct: 122 LANRLMHPKCEVEREYAVRVFGEVTGKTLHTLQKGVELEDGEAKFLTISGAPTPQHAEDE 181

Query: 188 GRNAWLTVSLKEGKNREIRKVMESLGLQVNRLIRVAYGPFQLGK-LEEGAVEEV 240
             N W  V+LKEG+NRE+R++ ES G+QV+RLIRV YGP +L K L +GA  E+
Sbjct: 182 SMNRWYNVTLKEGRNREVRRLWESQGVQVSRLIRVKYGPIELQKRLPQGAWVEL 235