Pairwise Alignments

Query, 781 a.a., ATP-dependent DNA helicase PcrA from Azospirillum sp. SherDot2

Subject, 720 a.a., DNA helicase II from Escherichia coli ECOR27

 Score =  524 bits (1349), Expect = e-153
 Identities = 304/755 (40%), Positives = 427/755 (56%), Gaps = 61/755 (8%)

Query: 33  LDGLNPTQRAAVEALDGPVLVLAGAGTGKTRVLTTRLAHLLMTRRAAAFQILAVTFTNKA 92
           LD LN  QR AV A    +LVLAGAG+GKTRVL  R+A L+     + + I+AVTFTNKA
Sbjct: 7   LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66

Query: 93  AREMRERVGHLMGIEPEGWWLGTFHALAARILRRHAELVGLKSNFTILDTDDQVRLIKQL 152
           A EMR R+G LMG    G W+GTFH LA R+LR H     L  +F ILD++DQ+RL+K+L
Sbjct: 67  AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126

Query: 153 LQAENIDSKKWPPRQVLGAIERWKDRGLTPDRLGDADGGDVAGGRVVAIYRAYQERLRTL 212
           ++A N+D K+WPPRQ +  I   KD GL P  +     G+        +Y+AYQE     
Sbjct: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQEACDRA 184

Query: 213 NACDFGDLLLHNLAIFQNHPDVLAEYHRKFKYLLVDEYQDTNVAQYLWLRILSQAHKNIC 272
              DF +LLL    ++ N P +L  Y  +F  +LVDE+QDTN  QY W+R+L+     + 
Sbjct: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244

Query: 273 CVGDEDQSIYAWRGAEIGNILRFETDFPGATIVKLEQNYRSTGHILAAASGLIANNQGRL 332
            VGD+DQSIY WRGA++ NI RF  DFPGA  ++LEQNYRST +IL+AA+ LI NN GRL
Sbjct: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304

Query: 333 GKTLWTEADGGERVKVKAVWDGEEEARWVGEEIETLQRKGTSLAQIAVLVRAGFQTREFE 392
           GK LWT+   GE + +   ++  +EAR+V   I+T Q  G +LA+ A+L R+  Q+R  E
Sbjct: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364

Query: 393 ERFITLGLPYKVLGGPRFYERQEIRDALAYFRVVNSGDDDLAFERIVNLPKRGVGPAAMQ 452
           E  +   +PY++ GG RF+ERQEI+DAL+Y R++ + +DD AFER+VN P RG+G   + 
Sbjct: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424

Query: 453 SLYTAARARGLSLTEAGWALTETDELKPKLRATLRGLLQDFFRWRTLMATVPHTELARTV 512
            +   +R R L+L +A   L +   L  +  + L+  ++         A +P       V
Sbjct: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484

Query: 513 LDESGYTRMWQEDKTPEAPGRLENLKELITAMAEFE---------NLPGFLEHVALVMEN 563
           + +SG   M++++K  +   R+ENL+EL+TA  +F           L  FL H AL    
Sbjct: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544

Query: 564 AEA-AGIEQVTVMTLHGAKGLEFDHVFLPGWEEGVFPNQRALDETGIAGLEEERRLAYVG 622
            +A    + V +MTLH AKGLEF  VF+ G EEG+FP+Q +LDE G   LEEERRLAYVG
Sbjct: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVG 602

Query: 623 LTRARRRAYVSHAANRRLYGNWVSAVPSRFVEEIPQDNVEAEAANGLFAGSGGRGGFAGG 682
           +TRA ++  +++A  RRLYG  V   PSRF+ E+P++ VE        +           
Sbjct: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS----------- 651

Query: 683 AGAYGAGGSAGGFGGGFQFRGSTRQAPAPKTITLDQGAYAVAPRPRPDAPFAKGARVFHQ 742
                              R  + Q      +  D G             +  G RV H 
Sbjct: 652 -------------------RPVSHQRMGTPMVENDSG-------------YKLGQRVRHA 679

Query: 743 KFGYGTVVGV----SEDKLEIDFDHSGSKKVMDSF 773
           KFG GT+V +       +L++ F   G K ++ ++
Sbjct: 680 KFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714