Pairwise Alignments

Query, 781 a.a., ATP-dependent DNA helicase PcrA from Azospirillum sp. SherDot2

Subject, 720 a.a., DNA helicase II from Dickeya dianthicola 67-19

 Score =  512 bits (1318), Expect = e-149
 Identities = 289/641 (45%), Positives = 398/641 (62%), Gaps = 16/641 (2%)

Query: 33  LDGLNPTQRAAVEALDGPVLVLAGAGTGKTRVLTTRLAHLLMTRRAAAFQILAVTFTNKA 92
           LD LN  QR AV A    +LVLAGAG+GKTRVL  R+A LL     + + ++AVTFTNKA
Sbjct: 7   LDSLNDKQRDAVAAARSNMLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSVMAVTFTNKA 66

Query: 93  AREMRERVGHLMGIEPEGWWLGTFHALAARILRRHAELVGLKSNFTILDTDDQVRLIKQL 152
           A EMR R+  L+G    G W+GTFH LA R+LR H    GL  +F ILD++DQ+RL+K+L
Sbjct: 67  AAEMRHRIDQLLGTGQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQLRLLKRL 126

Query: 153 LQAENIDSKKWPPRQVLGAIERWKDRGLTPDRLGDADGGDVAGGRVVAIYRAYQERLRTL 212
           ++A N+D K+WPPRQ +  I   KD GL P  + D+ G  V     + IY+AYQE     
Sbjct: 127 VKALNLDEKQWPPRQAMWYINGKKDEGLRPQHI-DSYGNPVEQ-TWLRIYQAYQEACDRA 184

Query: 213 NACDFGDLLLHNLAIFQNHPDVLAEYHRKFKYLLVDEYQDTNVAQYLWLRILSQAHKNIC 272
              DF +LLL    ++ N P +L  Y  +F  +LVDE+QDTN  QY W+R+L+     + 
Sbjct: 185 GLVDFAELLLRAHELWLNKPHILQHYRDRFNNILVDEFQDTNRIQYAWIRLLAGDSAKVM 244

Query: 273 CVGDEDQSIYAWRGAEIGNILRFETDFPGATIVKLEQNYRSTGHILAAASGLIANNQGRL 332
            VGD+DQSIY WRGA++ NI  F  DF   T ++LEQNYRST +IL AA+ LIA+N  RL
Sbjct: 245 IVGDDDQSIYGWRGAQVENIQHFLRDFSDVTTIRLEQNYRSTANILNAANALIAHNGDRL 304

Query: 333 GKTLWTEADGGERVKVKAVWDGEEEARWVGEEIETLQRKGTSLAQIAVLVRAGFQTREFE 392
           GK LWT+   GE + +   ++  +EAR+V   I+  Q  G +L++ A+L R+  Q+R  E
Sbjct: 305 GKNLWTDGIDGEPISLYCAFNELDEARFVVSRIKVWQEAGGALSECAILYRSNAQSRVLE 364

Query: 393 ERFITLGLPYKVLGGPRFYERQEIRDALAYFRVVNSGDDDLAFERIVNLPKRGVGPAAMQ 452
           E  +   LPY++ GG RF+ERQEI+DAL+Y R++ + +DD AFER+VN P RG+G   + 
Sbjct: 365 EALLQQSLPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGIGDRTLD 424

Query: 453 SLYTAARARGLSLTEAGWALTETDELKPKLRATLRGLLQDFFRWRTLMATVP-HTELART 511
            +   AR R L+L +A  AL +   L  +  A L+  L+      +  A +P H +  R 
Sbjct: 425 VVRQTARDRQLTLWQATRALLQEKVLAGRAAAALQRFLELVDALASDTADLPLHVQTDRV 484

Query: 512 VLDESGYTRMWQEDKTPEAPGRLENLKELITAMAEFE---------NLPGFLEHVALVME 562
           + D SG   M++++K  +   R+ENL+EL+TA  +F           L  FL H AL   
Sbjct: 485 IRD-SGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQDEDQDLLPLQAFLSHAALEAG 543

Query: 563 NAEA-AGIEQVTVMTLHGAKGLEFDHVFLPGWEEGVFPNQRALDETGIAGLEEERRLAYV 621
             +A A  + V +MTLH AKGLEF  VF+ G EEG+FP+Q +LDE G   LEEERRLAYV
Sbjct: 544 EGQADAYQDAVQLMTLHSAKGLEFPQVFVVGMEEGMFPSQMSLDEGG--RLEEERRLAYV 601

Query: 622 GLTRARRRAYVSHAANRRLYGNWVSAVPSRFVEEIPQDNVE 662
           G+TRA ++  +++A +RRLYG      PSRF+ E+P + VE
Sbjct: 602 GVTRAMQKLTLTYAESRRLYGKETYHRPSRFIGELPTECVE 642