Pairwise Alignments

Query, 781 a.a., ATP-dependent DNA helicase PcrA from Azospirillum sp. SherDot2

Subject, 723 a.a., DNA helicase II from Alteromonas macleodii MIT1002

 Score =  498 bits (1281), Expect = e-145
 Identities = 305/750 (40%), Positives = 410/750 (54%), Gaps = 60/750 (8%)

Query: 33  LDGLNPTQRAAVEALDGPVLVLAGAGTGKTRVLTTRLAHLLMTRRAAAFQILAVTFTNKA 92
           LD LN  QR AV A     LVLAGAG+GKTRVL  R+A L+     A F ILAVTFTNKA
Sbjct: 7   LDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENIAPFSILAVTFTNKA 66

Query: 93  AREMRERVGHLMGIEPEGWWLGTFHALAARILRRHAELVGLKSNFTILDTDDQVRLIKQL 152
           A+EMR R+  LMG      W+GTFH LA R+LR H     L  NF I+D+DDQ RLI+++
Sbjct: 67  AKEMRGRIESLMGRSLHNMWIGTFHGLAHRLLRAHHAEANLPENFQIIDSDDQYRLIRRI 126

Query: 153 LQAENIDSKKWPPRQVLGAIERWKDRGLTPDRLGDADGGDVAGGRVVAIYRAYQERLRTL 212
           L+A N+D K W PRQ+   I   KD GL P  +     GD     +  +Y AYQ+     
Sbjct: 127 LKAMNLDEKHWAPRQIQWYINGNKDEGLRPQHI--ETHGDHIQKTMREVYAAYQDACDRS 184

Query: 213 NACDFGDLLLHNLAIFQNHPDVLAEYHRKFKYLLVDEYQDTNVAQYLWLRIL-SQAHKNI 271
              DF +LLL    ++  +P+VLA Y R+F+ +LVDE+QDTN  QY WLR+L S  + NI
Sbjct: 185 GLVDFAELLLRAHELWAKNPEVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGGNNNI 244

Query: 272 CCVGDEDQSIYAWRGAEIGNILRFETDFPGATIVKLEQNYRSTGHILAAASGLIANNQGR 331
             VGD+DQSIY WRGA + NI  F  DF   T ++LEQNYRSTG+IL AA+ +I NN GR
Sbjct: 245 MIVGDDDQSIYGWRGANVDNIQHFLKDFNEPTTIRLEQNYRSTGNILKAANTVIDNNTGR 304

Query: 332 LGKTLWTEADGGERVKVKAVWDGEEEARWVGEEIETLQRKGTSLAQIAVLVRAGFQTREF 391
           LGK LWTE   GE + V A ++  +EAR++  +I+    +G +L   A+L R   Q+R  
Sbjct: 305 LGKELWTEDAQGELISVYAGFNELDEARFIVSKIKDWLNQGNALTDTAILYRNNAQSRVL 364

Query: 392 EERFITLGLPYKVLGGPRFYERQEIRDALAYFRVVNSGDDDLAFERIVNLPKRGVGPAAM 451
           EE  +  GL Y++ GG RF+ERQEI+DAL Y R+V+   DD AFER+VN P RG+G   +
Sbjct: 365 EEALLHEGLAYRIYGGLRFFERQEIKDALGYMRMVSHPHDDAAFERVVNTPSRGIGEKTL 424

Query: 452 QSLYTAARARGLSLTEAGWALTETDELKPKLRATLRGLLQDFFRWRTLMATVPHTELART 511
             +   AR    S+ +A   L      K +    ++  +             P  + A  
Sbjct: 425 SQVRDTARMHNCSMWQACQLLINEGGFKGRALNAMQSFVLLITELEQSTLDEPLDQQADK 484

Query: 512 VLDESGYTRMWQEDKTPEAPGRLENLKELITA---------MAEFENLPGFLEHVALVME 562
            + +SG   M+Q ++  +A  RLENL+EL+TA           E   L  FL H +L   
Sbjct: 485 AIRQSGLYAMYQAERGEKAQARLENLEELVTACKTFIVPEEAEEMSPLAAFLAHASLEAG 544

Query: 563 NAEA-AGIEQVTVMTLHGAKGLEFDHVFLPGWEEGVFPNQRALDETGIAGLEEERRLAYV 621
             +A    + V +MT+H AKGLEF  VFL G EEG+FP+Q   DE G   +EEERRL YV
Sbjct: 545 ETQADKDQDAVQMMTIHTAKGLEFPLVFLAGVEEGMFPSQMTNDEPG--RMEEERRLCYV 602

Query: 622 GLTRARRRAYVSHAANRRLYGNWVSAVPSRFVEEIPQDNVEAEAANGLFAGSGGRGGFAG 681
           G+TRA ++ Y+++A +RRLYG       SRF+ E+P D VE                   
Sbjct: 603 GMTRAMQKLYITYAESRRLYGQDKYHTASRFIREMPADCVEEVRLK-------------- 648

Query: 682 GAGAYGAGGSAGGFGGGFQFRGSTRQAPAPKTITLDQGAYAVAPRPRPDAPFAKGARVFH 741
                                 ST   P       ++ + A +     +  F+ G RV H
Sbjct: 649 ----------------------STISRPVH-----NRFSQATSHASFEETGFSLGERVVH 681

Query: 742 QKFGYGTVVGV----SEDKLEIDFDHSGSK 767
           +KFG G V+         +++++FD  GSK
Sbjct: 682 RKFGEGIVLNYEGSGEHGRVQVNFDEFGSK 711