Pairwise Alignments

Query, 250 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 231 a.a., flagellar hook assembly protein FlgD from Escherichia coli ECRC98

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 13/218 (5%)

Query: 29  TATETSKTPQTDADKTASATKGLGDNFQTFLTMLTTQMKNQDPLKPLDTNDMTKQLVDFA 88
           T T+ + T  +    ++       D   +FLT+L  Q+KNQDP  P++ N++T QL   +
Sbjct: 6   TTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQIS 65

Query: 89  NVE--QNIGT-----NSRLDKLVQLQSAGTASTNLAYLGRTVAFEGDNFQYSQGMTQAPL 141
            V   + + T     + ++D    LQ++      +   G TV   G   +     T  P 
Sbjct: 66  TVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTV-LAGTGSEEGAVTTTTPF 124

Query: 142 GYELATSAKSVRVDILDSNGNIIRSMP-GETTAGTKHAVSWDFKDNNGRAVQPGTYRMNV 200
           G EL  +A  V   I D NG ++R++  GE TAG  H+ +WD    +G     G+Y  NV
Sbjct: 125 GVELQQAADKVTATITDKNGAVVRTIDIGELTAGV-HSFTWDGTLTDGSTAPNGSY--NV 181

Query: 201 APVSENKNDTIKTTTYTFGTVSGIGNNKDGETVLNIGT 238
           A  + N    +      F  V G+    +G T L++GT
Sbjct: 182 AISASNGGTQLVAQPLQFALVQGVIRGNNGNT-LDLGT 218