Pairwise Alignments

Query, 357 a.a., Flagellar motor switch protein FliM from Azospirillum sp. SherDot2

Subject, 322 a.a., Flagellar motor switch protein FliM from Pseudomonas sp. DMC3

 Score =  143 bits (360), Expect = 7e-39
 Identities = 89/321 (27%), Positives = 164/321 (51%), Gaps = 10/321 (3%)

Query: 38  VLNQDEIDSLLGFDQGGAGDGDNSGIMALVNSALVNYE------RLPMLEVVFDRLVRMM 91
           +L+QDEID+LL     G    DN+     V S  +  +      R+P LE++ +R  R  
Sbjct: 6   LLSQDEIDALLHGVDDGLVQTDNAAEPGSVKSYDLTSQDRIVRGRMPTLEMINERFARYT 65

Query: 92  STSLRNFTSDNVEVSLDQISSVRFGDYLNSIPLPAMLSVFKAEEWDNYGLMVVDSALIYS 151
             S+ N    + +V++  +  ++FG+Y++S+ +P  L++ K +      L ++D+ L++ 
Sbjct: 66  RISMFNMLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDAKLVFK 125

Query: 152 IVDVLLGGRRGTAAMRIEGRPYTTIERNLVERMVHVVLSDLSAAFDPLSPVTFRFDRLET 211
           +VD   GG    A  +IEGR +T  E  +V  ++     DL  A+  +  V F +   E 
Sbjct: 126 LVDNFFGGDGRHA--KIEGREFTPTELRVVRMVLEQAFVDLKEAWQAIMEVNFEYINSEV 183

Query: 212 NPRFATIARPANAAVLVKLRIDMEDRGGRLELMIPYATLEPVRELLLQMFMGEKFGRDSI 271
           NP  A I  P+ A V+    I+++  GG L + +PY+ +EPVRE+L   F  +   +D  
Sbjct: 184 NPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQDER 243

Query: 272 WETHLASELMVTDVDLSAVLDEVTMTLHDVLNWRVGTRILLNATPDGAIELRCGDVSMFQ 331
           W   L  +++  DV + A +    + L D+L+ + G  I +    D  + +R   V  F+
Sbjct: 244 WVNALRQDVLDVDVPIGATVARRQLKLRDILHMQPGDVIPVEMPED--MIMRANGVPAFK 301

Query: 332 GRMGRKGGHIAVRLEKELPKQ 352
            +MG   G++A+++ + + ++
Sbjct: 302 VKMGSHKGNLALQVIEPIERR 322