Pairwise Alignments

Query, 357 a.a., Flagellar motor switch protein FliM from Azospirillum sp. SherDot2

Subject, 390 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  321 bits (822), Expect = 2e-92
 Identities = 170/354 (48%), Positives = 242/354 (68%), Gaps = 5/354 (1%)

Query: 6   ELSEEERLAAEWAALAEDSGDVGDM---GGGGSTRVLNQDEIDSLLGFDQGGAGDGDNSG 62
           EL+  ++ AA     AE++  + +       G T+ L+Q+EID LL F     G  + S 
Sbjct: 32  ELAAAQQTAAPAPPPAEEAAAMAEAMREALAGETKTLSQEEIDRLLNFGAPEGGGPEMSA 91

Query: 63  IMALVNSALVNYERLPMLEVVFDRLVRMMSTSLRNFTSDNVEVSLDQISSVRFGDYLNSI 122
           I  LV+S  VN +RLPML+VVFDR+VRM++TSLR F S NVE SL +I  +R+ D+ ++I
Sbjct: 92  IQRLVSSTTVNKDRLPMLDVVFDRMVRMLNTSLRQFASTNVEASLSKIEWLRYTDFQDAI 151

Query: 123 PLPAMLSVFKAEEWDNYGLMVVDSALIYSIVDVLLGGRRGTAAMRIEGRPYTTIERNLVE 182
            LPA++ V +AE WDN  L+ +DSALIY ++DVLLGGRR     RI+GR YT+IER + E
Sbjct: 152 ELPALIGVARAEPWDNQMLVTIDSALIYCMMDVLLGGRRSRPG-RIDGRAYTSIERKMTE 210

Query: 183 RMVHVVLSDLSAAFDPLSPVTFRFDRLETNPRFATIARPANAAVLVKLRIDMEDRGGRLE 242
           RM+ VVL DL  +FDPL+ V F FDRLE NP+FATI R  NA + V++ +++E R G ++
Sbjct: 211 RMMKVVLQDLGQSFDPLAQVDFVFDRLEVNPQFATITRATNAIIRVRIAVEVERRTGHID 270

Query: 243 LMIPYATLEPVRELLLQMFMGEKFGRDSIWETHLASELMVTDVDLSAVLDEVTMTLHDVL 302
           ++IPYATLEPVR  L+QMFMGEKFG DS+WE+HL +ELM + ++L AVL E  + L +VL
Sbjct: 271 IVIPYATLEPVRGKLVQMFMGEKFGHDSVWESHLKNELMRSKLELVAVLAETKVPLGEVL 330

Query: 303 NWRVGTRILLNATPDGAIELRCGDVSMFQGRMGRKGGHIAVRLEKEL-PKQEVM 355
            W+ G  + L  +PD  + +    + +F G MG++  +IAV+++ +L  KQE++
Sbjct: 331 AWQKGQSLKLRISPDQTVLVFSKTIPLFAGHMGQRNDNIAVKIDTDLDTKQELI 384