Pairwise Alignments

Query, 1039 a.a., Multidrug resistance protein MdtC from Azospirillum sp. SherDot2

Subject, 1031 a.a., MdtB/MuxB family multidrug efflux RND transporter permease subunit from Pseudomonas sp. SVBP6

 Score =  946 bits (2444), Expect = 0.0
 Identities = 497/1029 (48%), Positives = 711/1029 (69%), Gaps = 10/1029 (0%)

Query: 1    MNLSELCIRRPVMTILLTAALVLSGLAAYRQLPTAALPRVDFPVVSVTATLPGASPETMA 60
            MNLS L I RPV T L   A+VL+GL AY+ LP AALP+VD+P + V    PGASP+ M 
Sbjct: 1    MNLSRLFILRPVATTLSMLAIVLAGLMAYKMLPVAALPQVDYPTIRVMTLYPGASPQVMT 60

Query: 61   ASVASPLEREFSTIAGIDTITSNSTLGNTSITIQFVLERDIDAAAADVQAAIARTQRRLP 120
            ++V +PLER+F  + G+  + S S+ G + +T++F L+ ++D A   VQAAI      LP
Sbjct: 61   SAVTAPLERQFGQMPGLTQMASTSSGGASVLTLRFSLDMNMDVAEQQVQAAINAASNLLP 120

Query: 121  AEMTTPPSYRKVNPADQPILFLSLNSPTLPLAQLNDIAETLIQPKVATLPGVAQVQIYGS 180
             ++  PP Y KVNPAD P+L L+++S T+PL +LND+ +T +  K+A + GV  V I G 
Sbjct: 121  NDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKIAQIGGVGMVSIAGG 180

Query: 181  QKYAVRVQVNPNALALRGIGIDELQKALAAANANTPVGTLTGQQQQLVIAANPQLPDAAA 240
            Q+ AVR++VNP+ALA  G+ + +++  + A+N N P G   G  +  ++ AN QL     
Sbjct: 181  QRQAVRIKVNPDALASAGLNLADVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240

Query: 241  FRQLIVAYRNSAPVRLGDVAQVLDSVENDRTASWLNGTRSIMLAVQRQPDANTVDVVDRV 300
            +  LI+AY+N AP+RL DVA+++D  EN+R A+W N  ++++L +QRQP AN ++VVDR+
Sbjct: 241  YANLILAYKNGAPLRLKDVAEIVDGAENERLAAWANQNQAVLLNIQRQPGANVIEVVDRI 300

Query: 301  RELVPVFQTQLPAAAAIQVVNDRSESIRQAVEDVQFTLGLTIVLVVMVIFLFLRRLSATL 360
            + ++P     LPA   + V+ DR+++IR +V+DV+  L + I LVVMV F+FLRR SAT+
Sbjct: 301  KAMLPSITDNLPAGLDVSVLTDRTQTIRASVKDVRHELLIAIALVVMVTFVFLRRFSATI 360

Query: 361  IPALAVPISLIATAGGMHLLGFSVDNISLMALTLAVGLVVDDAIVMMENIVRYVEEGMKP 420
            IP++AVP+SLI T   MHL GFS++N++LMALT+A G VVDDAIVM+ENI R++EEG  P
Sbjct: 361  IPSVAVPLSLIGTFAVMHLAGFSINNLTLMALTIATGFVVDDAIVMLENISRHIEEGETP 420

Query: 421  FEAAIKGSREIGFTILSITLSLVAVFIPILLMGGVVGRLFHEFALVVTMSIGASAFVSLT 480
             +AA+KG+R+IGFT++S+T SL+AV IP+L M  VVGRLF EFA+ + ++I  S  VSLT
Sbjct: 421  MQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480

Query: 481  LTPMMCSRFLTHAHD-QKEGWFGRMLEGGFSAVLNGYARTLRWTLRHRPLMGLVMIGTVI 539
            LTPMMC+R L      + +G F R        +++ Y R L+W L+H+PL  LV + T+ 
Sbjct: 481  LTPMMCARLLKREPAIEAQGRFYRASGAWIDWMIDYYGRGLQWVLKHQPLTLLVAVATLG 540

Query: 540  GTALLYQAIPKGFFPTEDIGQIQVTTEARADIAFPSMAERQQQVAAIIKANPAVVDVISS 599
             T LLY  +PKGFFP +D G IQ  +EA   ++F +M++RQQ+++A+I  +PAV  + S 
Sbjct: 541  LTVLLYLVVPKGFFPVQDTGVIQGISEAPQSVSFTAMSQRQQELSAVILKDPAVQSLSSY 600

Query: 600  VGVGG--STGNQGRMFLTLKPRDERP-SATEVIQQIRRQVNGIPGMAVYMQPVQNLRIGG 656
            +GV G  +T N GR+ + LKP  ER  +A +VI +++ QV+ + G+ ++MQPVQ+L I  
Sbjct: 601  IGVDGDNATLNSGRLLINLKPHGERDLTAAQVIARLQPQVDKLLGIRLFMQPVQDLSIED 660

Query: 657  RASKSLYQYTIQGLDLDELYQWSGRLEQTLRGIPILQDVTSDLQLNNPQAYVHIDREKAA 716
            R S++ YQ+++   D + L QWSG+L   L+  P L DV SDLQ    Q ++ IDR+ A+
Sbjct: 661  RVSRTQYQFSLSSPDAELLAQWSGKLVDALQQRPELADVASDLQDKGLQVFLVIDRDAAS 720

Query: 717  TLGLGVDQVRSTLYSAFGQRQVSTIYTPSNDYQVLIELEPKYQGDDSSLSRIYVRSTTTG 776
             LG+ V  + + LY AFGQRQ+STIYT ++ Y+V+++ E         L +I+V+++  G
Sbjct: 721  RLGINVADITNALYDAFGQRQISTIYTQASQYRVVLQAEAASSIGPQVLEQIHVKASDGG 780

Query: 777  KLVPLDAFARVERTAGPLAVNHQGQLPAVTLSFNLAPGASLGQAVDLIRASEREMGLPPT 836
            + V L + AR+E+    LA+ H GQ PAV +SFNL  G +LG+AV +I   ++++G+P  
Sbjct: 781  Q-VRLSSLARIEQRQAQLAIAHIGQFPAVMMSFNLGQGVALGEAVKVIEQVQQDIGMPVG 839

Query: 837  VTTGFAGTAQVFQDAQAGQALLLSAAVLVIYIVLGVLYESFIHPLTILSGLPSAAIGALA 896
            V T F G A+ FQ + +   LL+ AAV+ +YIVLGVLYES+IHP+TILS LPSAA+GAL 
Sbjct: 840  VQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPVTILSTLPSAAVGALL 899

Query: 897  TLMLFDVELSVIAIIGILMLIGIVKKNAIMMIDFAVDARRN-GMSARDAIEQACLLRFRP 955
             L+L   +L +IAIIGI++LIGIVKKNAIMMIDFA++A RN GM+   AI QA LLRFRP
Sbjct: 900  ALILSGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMAPEAAIYQAALLRFRP 959

Query: 956  IIMTTMAAIMGTLPIAIAHGAAAELRQPLGLAVVGGLCVSQVLTLYITPSLYLYMEDFGH 1015
            I+MTT+AA+ G +P+ +A G+ AELRQPLGL +VGGL VSQVLTL+ TP +YLY +    
Sbjct: 960  ILMTTLAALFGAIPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDR--- 1016

Query: 1016 FMSNLFRSR 1024
             +S   RSR
Sbjct: 1017 -LSRRLRSR 1024