Pairwise Alignments

Query, 1039 a.a., Multidrug resistance protein MdtC from Azospirillum sp. SherDot2

Subject, 1045 a.a., MdtB/MuxB family multidrug efflux RND transporter permease subunit from Dickeya dianthicola 67-19

 Score =  929 bits (2402), Expect = 0.0
 Identities = 489/1016 (48%), Positives = 690/1016 (67%), Gaps = 5/1016 (0%)

Query: 4    SELCIRRPVMTILLTAALVLSGLAAYRQLPTAALPRVDFPVVSVTATLPGASPETMAASV 63
            S L I RP+ T LL  A++L+G+  YR LP +ALP VD+P + V    PGASP+ M ++V
Sbjct: 18   SRLFILRPIATTLLMIAILLAGIVGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAV 77

Query: 64   ASPLEREFSTIAGIDTITSNSTLGNTSITIQFVLERDIDAAAADVQAAIARTQRRLPAEM 123
             +PLE +F +++G+  ++S S+ G++ IT+QF L   +D A  DVQAAI      LP+++
Sbjct: 78   TAPLEHQFGSMSGLKQMSSQSSGGSSVITLQFQLSLSLDVAEQDVQAAINAATNLLPSDL 137

Query: 124  TTPPSYRKVNPADQPILFLSLNSPTLPLAQLNDIAETLIQPKVATLPGVAQVQIYGSQKY 183
              PP+Y KVNPAD PI+ L++ S  LPL Q+ D+ ET I  K+A + GV  V + G Q+ 
Sbjct: 138  PFPPTYNKVNPADPPIMTLAVTSTALPLTQVQDMIETRIAQKIAQVEGVGLVTLAGGQRP 197

Query: 184  AVRVQVNPNALALRGIGIDELQKALAAANANTPVGTLTGQQQQLVIAANPQLPDAAAFRQ 243
            +VRV++NP ALA  G+  + ++ A+ AAN NTP G+  G  + + ++AN Q+     +RQ
Sbjct: 198  SVRVKLNPGALAAYGLSSETVRTAITAANVNTPKGSFDGPARAVTLSANDQMRSLDDYRQ 257

Query: 244  LIVAYRNSAPVRLGDVAQVLDSVENDRTASWLNGTRSIMLAVQRQPDANTVDVVDRVREL 303
            LI+A++N+APVRL DVA V  + EN   A+W N  ++I+L +QRQP AN +   D +R L
Sbjct: 258  LIIAWKNNAPVRLQDVATVEQAAENTHLAAWANQNQAIVLNIQRQPGANVIATADHIRNL 317

Query: 304  VPVFQTQLPAAAAIQVVNDRSESIRQAVEDVQFTLGLTIVLVVMVIFLFLRRLSATLIPA 363
            +P  +  LP +  + ++ DR+ +IR +V DVQF L L I LVVMVI+LFLR   ATLIP+
Sbjct: 318  LPTLKASLPKSVDVALLTDRTTTIRASVGDVQFELILAIALVVMVIYLFLRNAVATLIPS 377

Query: 364  LAVPISLIATAGGMHLLGFSVDNISLMALTLAVGLVVDDAIVMMENIVRYVEEGMKPFEA 423
            +AVP+SL+ T   M+ LGFS++N++LMALT+A G VVDDAIV++ENI RY+E+G KP +A
Sbjct: 378  IAVPLSLVGTFAAMYFLGFSINNLTLMALTIATGFVVDDAIVVIENIARYIEKGEKPLQA 437

Query: 424  AIKGSREIGFTILSITLSLVAVFIPILLMGGVVGRLFHEFALVVTMSIGASAFVSLTLTP 483
            A+KG+ EIGFTI+S+T SL+AV IP+L MG ++GRLF EFA+ + +SI  SA VSLTLTP
Sbjct: 438  ALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIIGRLFREFAVTLAVSILISAVVSLTLTP 497

Query: 484  MMCSRFLTHAHDQKEGWFGRMLEGGFSAVLNGYARTLRWTLRHRPLMGLVMIGTVIGTAL 543
            MMC+R L+H    ++  F R  E  F  V+  Y R L   L H  +   V + T++ T L
Sbjct: 498  MMCARLLSHHSLSQQNRFTRASERFFDWVIALYGRGLTRVLSHPWITLSVALSTLVLTVL 557

Query: 544  LYQAIPKGFFPTEDIGQIQVTTEARADIAFPSMAERQQQVAAIIKANPAVVDVISSVGVG 603
            LY  IPKGFFP +D G IQ T +A   I+F  M ++QQQV  +I  +PAV  V S +GV 
Sbjct: 558  LYIVIPKGFFPIQDNGIIQGTVQASQTISFTGMVDKQQQVTTLIMQDPAVESVSSFIGVD 617

Query: 604  GSTG--NQGRMFLTLKPRDERPSATE-VIQQIRRQVNGIPGMAVYMQPVQNLRIGGRASK 660
            G+    N GR+ + LKP DER    + VI +++++ + +PG+ +Y+QPVQ+L I  + S+
Sbjct: 618  GTNPSLNSGRLQINLKPLDERSDRIQGVIDRLQQRTSALPGVQLYLQPVQDLTIDTQVSR 677

Query: 661  SLYQYTIQGLDLDELYQWSGRLEQTLRGIPILQDVTSDLQLNNPQAYVHIDREKAATLGL 720
            + YQ+T+Q + LDEL  W  +L   L+ +P LQDV+SD Q     AY+ ++R+ A+ LG+
Sbjct: 678  TQYQFTLQTMSLDELSTWVPKLTAELQKLPQLQDVSSDWQDGGAVAYLKVNRDSASRLGI 737

Query: 721  GVDQVRSTLYSAFGQRQVSTIYTPSNDYQVLIELEPKYQGDDSSLSRIYVRSTTTGKLVP 780
             + Q+ S LY+AFGQR +STIYT SN Y+V++E         ++LS I +   ++G +VP
Sbjct: 738  TMSQIDSALYNAFGQRLISTIYTQSNQYRVVLEQRHDSSNGLAALSDIRL-INSSGGVVP 796

Query: 781  LDAFARVERTAGPLAVNHQGQLPAVTLSFNLAPGASLGQAVDLIRASEREMGLPPTVTTG 840
            L + A VE   GPL+VNH  Q P+ T+SFN+APG +LG A+  I+ ++++M LP  + T 
Sbjct: 797  LSSIATVEERQGPLSVNHIDQFPSTTMSFNVAPGYALGDALKAIQQTQQQMQLPGDIITR 856

Query: 841  FAGTAQVFQDAQAGQALLLSAAVLVIYIVLGVLYESFIHPLTILSGLPSAAIGALATLML 900
            F G+   FQ A      L+ AAV+ +YIVLGVLYESFIHP+TILS LP+A +GAL  L+L
Sbjct: 857  FQGSTLAFQSALTSTIWLVVAAVVAMYIVLGVLYESFIHPVTILSTLPTAGVGALLALIL 916

Query: 901  FDVELSVIAIIGILMLIGIVKKNAIMMIDFAVDA-RRNGMSARDAIEQACLLRFRPIIMT 959
               +L++IAIIGI++LIGIVKKNAIMMIDFA+ A R  GM+   AI QACLLRFRPI+MT
Sbjct: 917  AGSDLNIIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMTPYQAIYQACLLRFRPILMT 976

Query: 960  TMAAIMGTLPIAIAHGAAAELRQPLGLAVVGGLCVSQVLTLYITPSLYLYMEDFGH 1015
            TMAA++  +P+  + G  AELR PLG+ +VGGL +SQVLTL+ TP +YL  +   H
Sbjct: 977  TMAALLSAVPLMFSTGVGAELRHPLGICMVGGLVMSQVLTLFTTPVIYLLFDRLAH 1032