Pairwise Alignments

Query, 683 a.a., Outer membrane protein assembly factor BamA from Azospirillum sp. SherDot2

Subject, 575 a.a., Translocation and assembly module subunit TamA from Pseudomonas sp. DMC3

 Score =  140 bits (354), Expect = 1e-37
 Identities = 145/576 (25%), Positives = 248/576 (43%), Gaps = 62/576 (10%)

Query: 116 LKDDHPPSLIGLERRADSDRDRLQTALRSAGYYDAKLDIRIDDPAAAGTLPAGGQAPPVK 175
           L D    +L+   R A+   ++ + A ++ GYY  ++D  +           GG+ P  +
Sbjct: 48  LGDRDEEALLRFSRGAE---EQARKAAQALGYYQPQIDSDVK----------GGEKP--R 92

Query: 176 VTVAVTPGPLYHIKTVTVR--GVSSSASSSILPKEVATDDLGLVAGAPAIAQKVLDAESE 233
           + + + PG    ++ VTVR  G ++S  S  +PK     DL L +GA     +  DA+  
Sbjct: 93  LVLNIDPGEPIRLRNVTVRVDGPAASLKSFRVPKS----DL-LKSGAVLNHGRYEDAKRV 147

Query: 234 LVGRLSKRGYAFAKVPGREVVVDHSDRTMDVTYTVDPGPLTRYGATRIEGLEQVDENLVR 293
           +  + S+ GY       ++++VD      D+    D GP    G    EG    DE+L++
Sbjct: 148 IQNQASRFGYFSGHFTSQKLMVDPRAGVADIELIYDSGPRYALGKVSFEGDTPFDEDLLQ 207

Query: 294 GRLAWKEGQVYDPGATDRARQDIAALQVFDTVRVRMADEPGPDGVTPVIVSVGERKRRFI 353
             + +K G+ YD        +D+ +   F+ VRV  A     + V PV V +  RK R +
Sbjct: 208 RMVPFKAGEPYDSELIAELNRDLQSSGYFEGVRVDAAPTAAQNDVIPVAVKLDTRKPRTM 267

Query: 354 GGGVTYSTQDGVGANAYWGHRNLFGGAEQLRVGVDVGRVAGSSGGTSSKGNDLP---DLR 410
           G G+ YST  G    A W    +    +      ++     + G       D P    LR
Sbjct: 268 GLGLGYSTDVGPRIKANWTRHWVNPQGDSYGWEAELSAPRQNVGLFYDIPLDPPLTDKLR 327

Query: 411 FSVNFRKPDFLAVKQ-SLLVNFAVV--NDQPPAYSRVASELTVKLERPLTDQLTVSYGVT 467
           ++  ++  D       S L+ F     +  P  + RV S    + E  L D   +S    
Sbjct: 328 WAGGYQFEDIEGSDTLSKLLTFGPEWHSKLPSGWQRVISLKWQREEYELGDDSGLS---- 383

Query: 468 GERGRVRTEDTTYQTSFIGVPLGAAWNGTDNLLNPTSGQRASLQV-TPWFPVGGDTKSPF 526
                          + +   +  ++  +DN ++P +G R S +       +G D    +
Sbjct: 384 ---------------TLLMPGISYSYLKSDNRIDPRNGYRLSFESKVAKEGLGSDNNLLY 428

Query: 527 TSILLNG-STYYDLGKDGRYVAAGRIGLGSILGTSLSDIPPDHRFYAGGGGSVRGYGFQK 585
            + L+ G +T +D     ++   GR+ +G       + IPP  RF+AGG  SVRGY +Q 
Sbjct: 429 GTALVKGLTTVFD-----KHRLLGRVQVGGSATNGYNSIPPSLRFFAGGDQSVRGYDYQS 483

Query: 586 AGPRDRYDDPVGGRSLFEIGAELRIKVTESIGVVPFVDAGTVYDK-AYPDFSEPLRVGAG 644
             P++     +GGR +     E +  + E   V  FVD G  ++K   PD    L+ G G
Sbjct: 484 LSPKNSDGKRIGGRYMVAGSVEYQYSIAEKWRVATFVDQGNSFNKLELPD----LKTGVG 539

Query: 645 LGLRYYTDFGPLRVDVGVPLNPASGDSRWQLYLSLG 680
           +G+R+ +  GP+R+D+   L+    D   +L+ S+G
Sbjct: 540 VGVRWVSPVGPIRLDLAHALD---DDGGIRLHFSMG 572