Pairwise Alignments

Query, 683 a.a., Outer membrane protein assembly factor BamA from Azospirillum sp. SherDot2

Subject, 810 a.a., outer membrane protein assembly factor BamA from Escherichia coli ECOR27

 Score =  118 bits (295), Expect = 1e-30
 Identities = 135/578 (23%), Positives = 216/578 (37%), Gaps = 89/578 (15%)

Query: 174 VKVTVAVTPGPLYHIKTVTVRGVSSSASSSILPKEVATDDLGLVAGAPAIAQKVLDAESE 233
           + VTV +T G  Y +  V V G  +  S+ I   E  T    +  G      KV   E +
Sbjct: 254 IYVTVNITEGDQYKLSGVEVSGNLAGHSAEI---EQLTK---IEPGELYNGTKVTKMEDD 307

Query: 234 LVGRLSKRGYAFAKVPGREVVVDHSDRTMDVTYTVDPGPLTRYGATRIEGLEQVDENLVR 293
           +   L + GYA+ +V     + D +D+T+ +   VD G        R EG +   + ++R
Sbjct: 308 IKKLLGRYGYAYPRVQSMPEIND-ADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLR 366

Query: 294 GRLAWKEGQVYDPGATDRARQDIAALQVFDTVRVRMADEPGPDGVTPVIVSVGERKRRFI 353
             +   EG        D+ ++ +  L  F+TV       PG      V+  V ER     
Sbjct: 367 REMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSF 426

Query: 354 GGGVTYSTQDGVGANAYWGHRNLFGGAEQLRVGVDVGRVAGSSGGTSSKGNDLPDLRFSV 413
             G+ Y T+ GV   A     N  G       G  VG       GT +      +L  + 
Sbjct: 427 NFGIGYGTESGVSFQAGVQQDNWLG------TGYAVG-----INGTKNDYQTYAELSVTN 475

Query: 414 NFRKPDFLAVKQSLLVNFAVVNDQPPA-YSRVASELTVKLERPLTDQLTVSYGV------ 466
            +   D +++   L  N    +D   + Y+  +    V L  P+ +  ++  G+      
Sbjct: 476 PYFTVDGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNS 535

Query: 467 ----------------TGERGRVRTEDTTYQTSFIGVPLGAAWNGTDNLLNPTSGQRASL 510
                            GE      +D +++T       G  +N  D    PT G R +L
Sbjct: 536 LSNMQPQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNL 595

Query: 511 QVTPWFPVGGDTKSPFTSILLNGSTYYDLGKDGRYVAAGRIGLGSILGTSLSDIPPDHRF 570
                 P G D +  +  + L+ +TY  +  D ++V  GR   G   G    ++P    F
Sbjct: 596 TGKVTIP-GSDNE--YYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENF 652

Query: 571 YAGGGGSVRGYGFQKAGPRDRY----------------------------DDPVGGRSLF 602
           YAGG  +VRG+     GP+  Y                            DD VGG ++ 
Sbjct: 653 YAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMA 712

Query: 603 EIGAE-------LRIKVTESIGVVPFVDAGTVYD--------KAYPDFSEP--LRVGAGL 645
               E       +  K   S+    F D GTV+D          YPD+S+P  +R+ AG+
Sbjct: 713 VASLEFITPTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGI 772

Query: 646 GLRYYTDFGPLRVDVGVPLNPASGDSRWQLYLSLGQAF 683
            L++ +  GPL      P     GD   Q   ++G+ +
Sbjct: 773 ALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIGKTW 810