Pairwise Alignments

Query, 683 a.a., Outer membrane protein assembly factor BamA from Azospirillum sp. SherDot2

Subject, 779 a.a., Outer membrane protein assembly factor BamA from Azospirillum sp. SherDot2

 Score =  113 bits (282), Expect = 4e-29
 Identities = 146/580 (25%), Positives = 229/580 (39%), Gaps = 67/580 (11%)

Query: 130 RADSDRDRLQTALRSAGYYDAKLDIRIDDPAAAGTLPAGGQAPPVK----VTVAVTPGPL 185
           R   DRD L+      GY D ++            + A  +  P K    +T  +  G  
Sbjct: 241 RLSYDRDLLRRFYLKEGYADFRV------------VSAVAELTPDKSDFFITFTIEEGER 288

Query: 186 YHIKTVTVRGVSSSASSSILPKEVATDDLGLVAGAPAIAQKVLDAESELVGRLSKRGYAF 245
           Y    V +         ++L   V T +     G    AQKV D  ++L   +    YAF
Sbjct: 289 YKFGKVDINTSLKQLDPAVLQNSVLTTE-----GDWYNAQKVEDTITKLTNAVGDLQYAF 343

Query: 246 AKVPGREVVVDHSDRTMDVTYTVDPGPLTRYGATRIEGLEQVDENLVRGRLAWKEGQVYD 305
             V  R +  +    T+D+TY ++ GP T      I G  +  + ++R  +   EG  ++
Sbjct: 344 VDVRPR-ITRNRETHTIDITYEINEGPRTFVDRIDISGNVRTLDKVIRREMLLSEGDPFN 402

Query: 306 PGATDRARQDIAALQVFDTVRVRMADEPGPDGVTPVIVSVGERKRRFIGGGVTYSTQDGV 365
                R+ Q I  L  F+ V +  A+   PD  T V V V E+    I  G  +ST DG 
Sbjct: 403 SSKLKRSEQRIKDLGFFERVNITTAESSAPDR-TVVNVDVAEQSTGEISIGAGFSTSDGP 461

Query: 366 GANAYWGHRNLFGGAEQLRVGVDVGRVAGSSGGTSSKGNDLPDLRFSVNFRKPDFLAVKQ 425
             +     RNL G  + LR+           G T S    L D+ F+  +     L+   
Sbjct: 462 LGDFSIRERNLLGRGQDLRL-----------GATLSGRRQLYDISFTEPYFMDRDLSAGV 510

Query: 426 SLLVNFAVVNDQPPAYSRVASELTVKLERPLTDQL--TVSYGV---------TGERGRVR 474
            +        D+  +++   +   ++L  PLT++L   V Y +         T     ++
Sbjct: 511 DVFRTRYNYQDE-SSFNEKNTGFALRLGYPLTERLRQRVYYQLQDTLIEEVPTTASKYIQ 569

Query: 475 TEDTTYQTSFIGVPLGAAWNGTDNLLNPTSGQRASLQVTPWFPVGGDTKSPFTSILLNGS 534
            +     TS IG  L   ++  ++ L PT G    L       +GG  +  F    L G 
Sbjct: 570 EQRGERLTSLIGQEL--TYDVRNSKLTPTEGYFIRL-TNDIAGLGGSVR--FLRNKLAGG 624

Query: 535 TYYDLGKDGRYVA-AGRIGLGSILGTSLSDIPPDHRFYAGGGGSVRGYGFQKAGPRD-RY 592
            Y  LG D   ++  G IG    LG     +    RF+  GG ++RG+     GPRD   
Sbjct: 625 YYLPLGDDQWVLSTTGEIGYIHGLG---KKVDLGDRFFI-GGDTLRGFNTAGIGPRDVST 680

Query: 593 DDPVGGRSLFEIGAELRIK--VTESIGVV--PFVDAGT-----VYDKAYPDFSEPLRVGA 643
            D +GG        E+     + E  G++   F D GT     + D    D  E +RV  
Sbjct: 681 GDALGGTRYARASVEMSFPFGLPEEFGLLGHAFTDVGTLGKVDIKDPNVKD-DESIRVSI 739

Query: 644 GLGLRYYTDFGPLRVDVGVPLNPASGDSRWQLYLSLGQAF 683
           G G+ + + FGP+R+DV +P+     D +  +  S G  F
Sbjct: 740 GTGVSWKSPFGPIRLDVALPIRKEGYDKKELVRFSFGTRF 779



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 280 RIEGLEQVDENLVRGRLAWKEGQVYDPGATDRARQDIAALQVF-DTVRVRMAD 331
           R+EG ++++ + VR  L  + G  +DP   D++ + +    +F D V  R  D
Sbjct: 56  RVEGTQRIEPSTVRSYLTIQPGDPFDPDRIDQSLKSLFNTGLFADVVLKREGD 108