Pairwise Alignments

Query, 285 a.a., HTH-type transcriptional activator RhaS from Azospirillum sp. SherDot2

Subject, 290 a.a., transcriptional regulator, AraC type; possible DNA gyrase inhibitor from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  124 bits (312), Expect = 2e-33
 Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 17/286 (5%)

Query: 5   EYDERFTRLFDYIDQNLEGDLSLDRLSDVACLSKFHFHRLFSAHFDISVGKYIQLARLKR 64
           +Y +R  R+  Y+  +L+  L L RL++VA LS +H+HR++ A    ++   ++  RL +
Sbjct: 9   DYQQRLGRVIAYLHDHLDEPLDLHRLAEVAHLSPYHWHRVYHALHGETIAVTVRRLRLHK 68

Query: 65  ASFRLAFNPADKVIDIALDAGFETPESFSRAFRKTFGQTPSTFRKTPEWRQWHDRYRHIK 124
           A+  LA N +  V  +A   G+   +SF+RAFR  +G +P  +R+  E    H  +R  +
Sbjct: 69  ATGYLA-NTSLPVEQLARRCGYPNAQSFARAFRTAYGMSPLQYRQQGE----HVAFRAAQ 123

Query: 125 RKRIRT--MDVSIVDFAPVQVAAYCHRGPIEDVNDSV-RIFIDWRKTSGLSPRDRCRTFG 181
             +      +VS+     V++A   HRG    +  +  R ++       + P  R     
Sbjct: 124 AAQAVPPGYEVSVRAIPRVRLAGLDHRGSYMGIGQAFERSYVQLAARGQVGPSSRWIAEY 183

Query: 182 VAFDNPETTEPADFRFDICGEIDGEVPENPQ---GVVKKLIPGGRCAVVRHRGSHEQIGE 238
           V  D+P           +C      VP+  +    +V   + GG CAV+RHRG +  +  
Sbjct: 184 V--DDPSAVPERQ----LCSRAGLSVPDGAEVAPPLVAFEVGGGPCAVLRHRGPYATMRA 237

Query: 239 VVRFLYGRWLPESGEELRDFPVYFHYLNFIGETAEHDLLTDVYLPL 284
             ++LYG WL +SG E+ D PV+  YLN   +TA  DLLTD+ LPL
Sbjct: 238 AYQWLYGHWLVDSGHEVGDAPVFEEYLNNPRDTAPADLLTDICLPL 283