Pairwise Alignments
Query, 227 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 1253 a.a., RTX toxin from Ralstonia solanacearum PSI07
Score = 103 bits (258), Expect = 1e-26
Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 14/118 (11%)
Query: 6 GTSNNDAMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLIGGLGNDQLHGGDGND 65
GT NNDA G A G + N GND L G+ GND+L GG G+D ++GGDGND
Sbjct: 665 GTENNDAFAGDA---------GANTFNAGAGNDLLDGQAGNDNLSGGAGDDVIYGGDGND 715
Query: 66 WLGDPYGGNEAGNDSMWGDAGNDQLFGGEGNDWLDGGTGDDILKGMRGDDTMIGGAGN 123
L GN+ G D++ G G+D L+GG GND LDGGTG+D L G G+DT + G G+
Sbjct: 716 IL----QGND-GADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGD 768
Score = 101 bits (251), Expect = 8e-26
Identities = 59/135 (43%), Positives = 73/135 (54%), Gaps = 17/135 (12%)
Query: 12 AMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLIGGLGNDQLHGGDGNDWLGDPY 71
A+ G L G D IN GGND +YG+ G+D L GG GND ++GGDGND L
Sbjct: 1041 ALIGDDTAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIYGGDGNDILR--- 1097
Query: 72 GGNEAGNDSMWGDAGNDQLFGGEGNDWLDGGTGDDILKGMRGDDTMI--GGAGNDTLYD- 128
G A ND L+GG GND L+GGTG+D L G G DT + G G DT+Y+
Sbjct: 1098 -----------GGADNDNLYGGNGNDILEGGTGNDYLSGENGSDTYLFNAGWGQDTVYNY 1146
Query: 129 SYRDGGADLFRPGTG 143
G +D+ GTG
Sbjct: 1147 DTSSGRSDIIAFGTG 1161
Score = 94.7 bits (234), Expect = 7e-24
Identities = 50/112 (44%), Positives = 64/112 (57%), Gaps = 14/112 (12%)
Query: 12 AMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLIGGLGNDQLHGGDGNDWLGDPY 71
A+ G L G D IN GGND +YG+ G+D L GG GND ++GG+
Sbjct: 856 ALIGDDTAQTLVGYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIYGGE--------- 906
Query: 72 GGNEAGNDSMWGDAGNDQLFGGEGNDWLDGGTGDDILKGMRGDDTMIGGAGN 123
GND++ G A ND L+GG GND LDGGTG+D L G G+DT + G G+
Sbjct: 907 -----GNDTLRGGADNDNLYGGNGNDVLDGGTGNDTLSGEGGNDTYLFGKGD 953
Score = 92.4 bits (228), Expect = 3e-23
Identities = 62/153 (40%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 32 NGAGGNDQLYGERGNDSLIGGLGNDQLHGGDGNDWLGDPYGGNEAGNDSMWGDAGNDQLF 91
+G ND G+ G ++ G GND L G GND L GG AG+D ++G GND L
Sbjct: 664 SGTENNDAFAGDAGANTFNAGAGNDLLDGQAGNDNLS---GG--AGDDVIYGGDGNDILQ 718
Query: 92 GGEGNDWLDGGTGDDILKGMRGDDTMIGGAGNDTLYDSYRDGGAD--LFRPGTGDDTMVS 149
G +G D LDGGTGDD L G G+DT+ GG GNDTL +GG D LF G G D + S
Sbjct: 719 GNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSG---EGGNDTYLFGKGDGQDFINS 775
Query: 150 YTDGQVDRFLMEQATGGFGHDTISYFERGIDQI 182
D + + Q G + G D +
Sbjct: 776 DYDTSAGKLNVLQFKDGVSPSEVIVTRSGSDLV 808
Score = 87.8 bits (216), Expect = 9e-22
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 21/167 (12%)
Query: 42 GERGNDSLIGGLGNDQLHGGDGNDWLGDPYGGNEAGNDSMWGDAGNDQLFGGEGNDWLDG 101
G ND+ G G + + G GND L +AGND++ G AG+D ++GG+GND L G
Sbjct: 665 GTENNDAFAGDAGANTFNAGAGNDLLD-----GQAGNDNLSGGAGDDVIYGGDGNDILQG 719
Query: 102 GTGDDILKGMRGDDTMIGGAGNDTLYDSYRDGGADLFRPGTGDDTMVSYTDGQVDRFLME 161
G D L G GDDT+ GGAGNDTL DG GTG+DT+ +G D +L
Sbjct: 720 NDGADTLDGGTGDDTLYGGAGNDTL-----DG-------GTGNDTLSG--EGGNDTYLFG 765
Query: 162 QATG-GFGHDTISYFERGIDQIEF-HGYSAGQMSLTSSGFQSTFTFA 206
+ G F + ++ ++F G S ++ +T SG + A
Sbjct: 766 KGDGQDFINSDYDTSAGKLNVLQFKDGVSPSEVIVTRSGSDLVLSIA 812
Score = 79.7 bits (195), Expect = 2e-19
Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 32/189 (16%)
Query: 6 GTSNNDAMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLIGGLGNDQLHGGDGND 65
G + D + +D + G GDD ++G GND +YG GND+L GG ND L+GG+GND
Sbjct: 868 GYTEADTINALGGNDNVYGQGGDDVLDGGAGNDTIYGGEGNDTLRGGADNDNLYGGNGND 927
Query: 66 WLGDPYGGNEAGNDSMWGDAGND-QLFG-GEGNDWL-----------------DGGTGDD 106
L GG GND++ G+ GND LFG G+G D++ DG + +
Sbjct: 928 VLD---GG--TGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSAGKLNVLQFKDGVSPSE 982
Query: 107 ILKGMRGDDTMIGGAGNDTLYDS----YRDGGADLFRPGTGDDTMVSYTDGQVDRFLMEQ 162
++ G D ++ AG + Y D A+ + P V ++DG +
Sbjct: 983 VIVTRSGSDLVLSIAGTTDKITANMVFYWDDTANPYNP----VQQVKFSDGTTWDLATIK 1038
Query: 163 ATGGFGHDT 171
A G DT
Sbjct: 1039 AKALIGDDT 1047
Score = 78.6 bits (192), Expect = 5e-19
Identities = 63/187 (33%), Positives = 87/187 (46%), Gaps = 32/187 (17%)
Query: 8 SNNDAMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLIGGLGNDQLHGGDGNDWL 67
+ ND + G A +D L G GDD I G GND L G G D+L GG G+D L+GG GND L
Sbjct: 685 AGNDLLDGQAGNDNLSGGAGDDVIYGGDGNDILQGNDGADTLDGGTGDDTLYGGAGNDTL 744
Query: 68 GDPYGGNEAGNDSMWGDAGND-QLFG-GEGNDWL-----------------DGGTGDDIL 108
GG GND++ G+ GND LFG G+G D++ DG + +++
Sbjct: 745 D---GG--TGNDTLSGEGGNDTYLFGKGDGQDFINSDYDTSAGKLNVLQFKDGVSPSEVI 799
Query: 109 KGMRGDDTMIGGAGNDTLYDS----YRDGGADLFRPGTGDDTMVSYTDGQVDRFLMEQAT 164
G D ++ AG + Y D A+ + P V ++DG +A
Sbjct: 800 VTRSGSDLVLSIAGTTDKITANMVFYWDDTANPYNP----VQQVKFSDGTTWDLATIKAK 855
Query: 165 GGFGHDT 171
G DT
Sbjct: 856 ALIGDDT 862
Score = 70.9 bits (172), Expect = 1e-16
Identities = 82/283 (28%), Positives = 104/283 (36%), Gaps = 89/283 (31%)
Query: 5 WGTSNNDAMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLIGGLGND-QLHG-GD 62
+G ND + G D LDG GDD + G GND L G GND+L G GND L G GD
Sbjct: 709 YGGDGNDILQGNDGADTLDGGTGDDTLYGGAGNDTLDGGTGNDTLSGEGGNDTYLFGKGD 768
Query: 63 GNDWLGDPYGGN---------------------EAGNDSM-----------------WGD 84
G D++ Y + +G+D + W D
Sbjct: 769 GQDFINSDYDTSAGKLNVLQFKDGVSPSEVIVTRSGSDLVLSIAGTTDKITANMVFYWDD 828
Query: 85 AGN-----DQLFGGEGNDW------------------LDGGTGDDILK---------GMR 112
N Q+ +G W L G T D + G
Sbjct: 829 TANPYNPVQQVKFSDGTTWDLATIKAKALIGDDTAQTLVGYTEADTINALGGNDNVYGQG 888
Query: 113 GDDTMIGGAGNDTLYDSYRDGGADLFRPGTGDDTMVSYTDGQVDRFLMEQATGGFGHDTI 172
GDD + GGAGNDT+Y G D R G +D + V GG G+DT+
Sbjct: 889 GDDVLDGGAGNDTIYGG---EGNDTLRGGADNDNLYGGNGNDV-------LDGGTGNDTL 938
Query: 173 SYFERGIDQIEFHGYSAGQMSL-----TSSGFQSTFTFADGSS 210
S E G D F G GQ + TS+G + F DG S
Sbjct: 939 S-GEGGNDTYLF-GKGDGQDFINSDYDTSAGKLNVLQFKDGVS 979
Score = 65.9 bits (159), Expect = 4e-15
Identities = 54/162 (33%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 10 NDAMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLIGGLGNDQLHGGDGNDWLGD 69
ND + G DD LDG G+D I G GND L G ND+L GG GND L GG GND+L
Sbjct: 1066 NDNVYGQGGDDVLDGGAGNDTIYGGDGNDILRGGADNDNLYGGNGNDILEGGTGNDYLSG 1125
Query: 70 PYGGNEAGNDSMWG-DAGNDQLFGGEGNDWLDGGTG---DDILKGMRGDD---TMIGGAG 122
G + ++ WG D + +D + GTG D + D +MIG
Sbjct: 1126 ENGSDTYLFNAGWGQDTVYNYDTSSGRSDIIAFGTGIAADQLWFRRVNSDLEVSMIGSTD 1185
Query: 123 NDTLYDSYRDGGADLFRPGTGDDTMVSYTDGQVDRFLMEQAT 164
T+ + Y + + T D + D QVD + A+
Sbjct: 1186 KTTISNWYSGSAYHVNQFTTADGKQL--LDTQVDSLVQAMAS 1225
Score = 59.7 bits (143), Expect = 3e-13
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 5 WGTSNNDAMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLIGGLGNDQLHGGDGN 64
+G +D + G A +D + G DG+D + G ND LYG GND L GG GND L G +G+
Sbjct: 1070 YGQGGDDVLDGGAGNDTIYGGDGNDILRGGADNDNLYGGNGNDILEGGTGNDYLSGENGS 1129
Query: 65 D 65
D
Sbjct: 1130 D 1130
Score = 46.6 bits (109), Expect = 2e-09
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 5 WGTSNNDAMTGTAFDDRLDGLDGDDRINGAGGNDQLYGERGNDSLI--GGLGNDQLHGGD 62
+G ND + G A +D L G +G+D + G GND L GE G+D+ + G G D ++ D
Sbjct: 1088 YGGDGNDILRGGADNDNLYGGNGNDILEGGTGNDYLSGENGSDTYLFNAGWGQDTVYNYD 1147
Query: 63 GNDWLGDPYG-GNEAGNDSMWGDAGNDQL 90
+ D G D +W N L
Sbjct: 1148 TSSGRSDIIAFGTGIAADQLWFRRVNSDL 1176