Pairwise Alignments

Query, 527 a.a., Periplasmic serine endoprotease DegP from Azospirillum sp. SherDot2

Subject, 490 a.a., Do family serine endopeptidase from Rhodanobacter sp000427505 FW510-R12

 Score =  311 bits (797), Expect = 4e-89
 Identities = 195/489 (39%), Positives = 275/489 (56%), Gaps = 25/489 (5%)

Query: 44  AVMGGIAAAPAQAQAATPNRNAPGSFADLAEKLLPAVVNISTSQNAPQRPQGQRPEIPQF 103
           A++G  +A   QAQA  P   A   F  + +K  PAVV++    N  ++   +       
Sbjct: 13  ALLGIASAGTVQAQA--PAAAALPDFTGIVQKNAPAVVHVEARYNGERQGNSRSMHGQTM 70

Query: 104 P----PGSPFEDFFKDFFDRQQQQDQPQRKATSLGSGFIIDAKNGYVVTNNHVVQDADEI 159
           P    P  P  +  + FF         ++K  SLGSGFII   +GY++TNNHVV  AD++
Sbjct: 71  PGQGMPDDPQAEILRRFFGMPMMPSPQEQKHISLGSGFIISG-DGYILTNNHVVDHADKV 129

Query: 160 TVILQDDTNIKAELVGKDSKTDLALLKIKTSHPLVAVPFGDSDAMRVGDWVLAIGNPFGL 219
           TV LQD   + A+++G D   D+ALLK+     L AV  GDS +++ G WVLAIG+PFG 
Sbjct: 130 TVRLQDRRTLTAKVIGTDPTYDIALLKVDAGGSLPAVTLGDSRSLKPGQWVLAIGSPFGF 189

Query: 220 GGSVTAGIISARQRNIDAG--PYDDFLQTDASINRGNSGGPMFNLNGEVIGINTAIFSPS 277
             +VT GI+SA  RN+     PY  F+QTD  INRGNSGGP+F+L G V+GIN+ I+S +
Sbjct: 190 DYTVTQGIVSAVGRNLGQRDQPYTSFIQTDVPINRGNSGGPLFDLQGRVVGINSQIYSNT 249

Query: 278 GGSVGIGFAIPSNLAKQVVAQLKDYGKTRRGWLGVRIQAVTPEIAESLGLPGHKGALVAS 337
           G   G+ F+IP ++A   V QLK  G   RG LGV +Q V  ++ ++ GL    GA V  
Sbjct: 250 GTYSGVAFSIPIDVAMNAVQQLKSKGYVSRGMLGVTVQPVDDDMVKAFGLDNGVGAAVVD 309

Query: 338 VTPDGPAAKGGIQAGDVVTRFDGREIDEMRRLPRVVAETSIDKAVPVEVWRKGKSQTVQV 397
           VT    AAK GIQ+GDV+  +DGR + +   LP +V  T     VPVE+ R GK QT+QV
Sbjct: 310 VTAGSGAAKAGIQSGDVILAYDGRTLQQAPDLPPLVGMTKPGSKVPVEILRNGKKQTLQV 369

Query: 398 KVGELEAAEEQGLLAAGPDEKQPPKDKAP--AQKPTESLGMKLTAITPELRQQYEIKPDM 455
            VG  EA+ ++  +          +  AP  A+  +  LG+ + +I  + R Q  +KP  
Sbjct: 370 TVG--EASRDRNAMNG--------QGTAPSLARSGSAVLGLTVQSIDDDTRTQLGLKPG- 418

Query: 456 KGVVITDVAGNSTAAEKGLRAGDVIIEVGQEEVRKPEDVTAKVQKAKEQSKKSVLLLVDR 515
           +GVVI D+ G S AA+ GL+ GDVI+ V Q++V    +  A  +  K  S  +VLLLV R
Sbjct: 419 QGVVIGDITG-SVAAQAGLQTGDVILMVNQQKVGSVAEFEAATKGVKAGS--TVLLLVRR 475

Query: 516 KGDLRFVAI 524
                F+ +
Sbjct: 476 GEQSSFIGL 484



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 310 LGVRIQAVTPEIAESLGLPGHKGALVASVTPDGPAAKGGIQAGDVVTRFDGREIDEMRRL 369
           LG+ +Q++  +    LGL   +G ++  +T    AA+ G+Q GDV+   + +++  +   
Sbjct: 398 LGLTVQSIDDDTRTQLGLKPGQGVVIGDIT-GSVAAQAGLQTGDVILMVNQQKVGSVAEF 456

Query: 370 PRVVAETSIDKAVPVEVWRKGKSQTVQVKVGELE 403
                       V + V R  +S  + + V + E
Sbjct: 457 EAATKGVKAGSTVLLLVRRGEQSSFIGLTVPDGE 490