Pairwise Alignments

Query, 229 a.a., Transcriptional regulatory protein DegU from Azospirillum sp. SherDot2

Subject, 222 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

 Score =  112 bits (281), Expect = 4e-30
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 9/216 (4%)

Query: 4   VRAFLIDSNKLFREGLKRLLDD-SPFQIVAEAGNLREALGSVENGIRPQLVLLDLQNGGD 62
           ++  + D +KL R+GL+  L +  P   + +A  L EA+  +E      LVLLDL   G 
Sbjct: 1   MQILVADDHKLVRDGLRPFLQELDPGVEILDAATLGEAIKVIEETPGIGLVLLDLMMPGM 60

Query: 63  EEADGMRRLRALLPDTRLVILTSDLCTRRLANALEAGADGYLMKDLSSDALAQSLKLVMM 122
           +   G+++++  +P+T +VI++       + +A++AGA G++ K +S  A+  +L+LV+ 
Sbjct: 61  DGLSGLQQIKTRIPETPVVIVSGYSTRDHVVSAVQAGAAGFIPKTVSGTAMVNALRLVLS 120

Query: 123 GEKVFPTHL------AALLISGRVNGNGTEMPVSRKGLSQREVQILRCLLNGDSNKMIAN 176
           GEK  P+           +        G   P  R  LS+RE +IL  L+ G +NK IA 
Sbjct: 121 GEKYLPSSTFFEDPSNQSIAPAGAKPTGAPPPFDR--LSRREGEILAQLVEGRTNKEIAI 178

Query: 177 HLNITEATVKVHLKSLLRKINASNRTQAAIWALNNG 212
            L++ E T+KVHL+++ RKI A+NR QA   AL +G
Sbjct: 179 ALSLQEITIKVHLRNVYRKIGAANRAQAVRIALQSG 214