Pairwise Alignments

Query, 331 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 330 a.a., Broad-specificity amino acid ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  365 bits (937), Expect = e-106
 Identities = 188/316 (59%), Positives = 235/316 (74%), Gaps = 16/316 (5%)

Query: 28  VGALAVLVALLAVPFLLYPVFLMKVLCFALFACAFNLLIGFGGLLSFGHAAFFGSAAYVT 87
           V AL +L  +LA  F  YPVF+MK++CFALFA AFNLL+GF GLLSFGHAAF G +AYV 
Sbjct: 10  VYALLLLALVLAPFFGAYPVFVMKLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAYVA 69

Query: 88  AHTVKVWGLSPELGILLGTAASAFLGILFGSIAIRRQGIYFAMITLALSQMVFFLALQLP 147
            H +KVWGL+PELG++ GT   AFLG +FG +AIRRQGIYFAMITLAL+QM+FF+ALQ  
Sbjct: 70  GHAMKVWGLTPELGLIAGTLTGAFLGWVFGVLAIRRQGIYFAMITLALAQMMFFVALQAK 129

Query: 148 FTHGEDGIQAVPRGVLFGVFDLNNPLAMYYTVLGVFLIGFAIIWRTVHSPFGQVLKAIRE 207
           FT GEDG+Q VPRG LFG+ DL++ L MYY  L + +  F +I RT+HSPFGQVLK I+E
Sbjct: 130 FTGGEDGLQGVPRGKLFGLIDLSSDLTMYYVALVIVVAAFLLIVRTIHSPFGQVLKGIKE 189

Query: 208 NEPRAISLGYRTERYKLMAFVLSATLAGLAGGTKAIVFQLATLTDVTWQMSGEVVLMTLL 267
           NEPRA+SLGY   R+KL+AFV+SA L+GLAG  K +V   ATL+DV W  SG+V+LMTL+
Sbjct: 190 NEPRALSLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWTASGQVILMTLV 249

Query: 268 GGMGTLTGPVIGAALVVTLEN-------YLAATSL---------PVPVVIGCIFVACVLV 311
           GG+GTL+GP++G+A+VV LEN       +LA  +           V +V G IFV CVL 
Sbjct: 250 GGLGTLSGPLVGSAVVVLLENKIGELGSFLARITTIDWFNTLGESVTMVTGLIFVICVLA 309

Query: 312 FRRGIAGEIQARFEKQ 327
           FR+GI GEI A  E++
Sbjct: 310 FRKGIMGEIIAFIERR 325