Pairwise Alignments

Query, 427 a.a., Diaminopimelate decarboxylase from Azospirillum sp. SherDot2

Subject, 387 a.a., Pyridoxal 5-phosphate (PLP)-dependent ornithine decarboxylase from Pseudomonas sp. S08-1

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 114/377 (30%), Positives = 167/377 (44%), Gaps = 41/377 (10%)

Query: 44  EEPMHCIRPGVLADTADSFLKAFAGATDAVARGGDVLYAVKCNPEPAVLRALWAGGVRHF 103
           E P   I    ++++ D  +  F  A         + YAVK NP   +   L   G  +F
Sbjct: 25  ETPFVVIDKQTISNSYDQLVNCFPFAK--------IYYAVKANPAIEITELLRDKG-SNF 75

Query: 104 DVASPGEIRLIRQ--MFPDAVLHYMHPVKGRQAIRNAYHQYGVRDFVLDSREELDKILEE 161
           D+AS  E+  +    + P+ +  Y + +K  + IR  + + GVR F  DS  +L  I + 
Sbjct: 76  DIASIYELDKVMSAGVGPERI-SYGNTIKKARDIRYFFEK-GVRLFATDSEADLRNIAKA 133

Query: 162 TDGAADLGLVVRLSLPKGNAVYD--LSGKFGAAITDAVELLRAARAAA-AKVGLSFHVGS 218
             GA    + VR+ L +G+   D  LS KFG     A++LL  A+       G+SFHVGS
Sbjct: 134 APGAK---VYVRI-LTEGSTSADWPLSRKFGCNPDMALDLLILAKQLGLVPYGISFHVGS 189

Query: 219 QMLDPSAYERAIALAGYVI----AESGIDLDVLDVGGGFPVSYPGVTPPPLGDFMAAIAR 274
           Q  D   ++ AIA    +      E GI L ++++GGGFP +Y   T   L  +   I R
Sbjct: 190 QQRDIDVWDAAIAKVKVIFERLKEEDGITLKMINMGGGFPANYIQRT-NDLETYAEEITR 248

Query: 275 GIAAIDLPAQCRLWCEPGRALVAPGVSLVVQVV-----KRRGSE--LFINDGVYGALSDA 327
            +          +  EPGR+L+A    LV +VV      R   E  ++ + G +  L + 
Sbjct: 249 FLKEDFGDELPEIILEPGRSLIANAGILVSEVVLIARKSRTAVERWIYTDVGKFSGLIET 308

Query: 328 GVPGFRFPARLIRPFEAMTDAGDEAFSFYGPTCDSADKMAG--PFHLPADVKAGDWIELG 385
                +FP    R  E       E     GPTCDSAD M     + LP ++ A D +   
Sbjct: 309 MDESIKFPIWTERKGEM------EEVIIAGPTCDSADIMYENYKYGLPLNLAAEDRLYWL 362

Query: 386 QLGAY-GSCLRTAFNGF 401
             GAY  S     FNGF
Sbjct: 363 STGAYTTSYSAVEFNGF 379