Pairwise Alignments

Query, 532 a.a., Protein translocase subunit SecD from Azospirillum sp. SherDot2

Subject, 626 a.a., Protein translocase subunit SecD from Variovorax sp. SCN45

 Score =  324 bits (831), Expect = 5e-93
 Identities = 189/484 (39%), Positives = 283/484 (58%), Gaps = 22/484 (4%)

Query: 47  LGLDLRGGSHLLLEVDMATVIRDRVEGLVDGARQQLRTANVGYTALNAGERAVTVQLRDP 106
           LGLDLRGG   LL+VDM   I  + E      R   R  N+  TA++   + V V  RD 
Sbjct: 128 LGLDLRGGVDFLLQVDMKGAIDKKAESFASDLRTTFRDKNIRGTAVSRNGQTVEVSFRDA 187

Query: 107 AQAEEAVKALRQLSSPVGRTALGGGQPDLDVTVNGGTVTVALSEVALRDRATQAIEQSIE 166
           A  + A + ++     +  T    G        +   +  ++   A R     A++Q+I 
Sbjct: 188 ASLDAAKRLIQDQFQDLSTTDSQDG--------SNWRLVASIKPEAARRLQDAALKQNIT 239

Query: 167 IVRRRIDETGVNEPTIARQGNDRILVQLPGVEDPDRIKRLLGTTAKMTFRLVDVNADPST 226
            +  RI+E GV EP I +QG DRI+VQLPGV+D  + K +LG TA +  R+VD +A+   
Sbjct: 240 TLHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKEILGRTATLEMRMVDESAEGRA 299

Query: 227 -----GRAPPGSEILPSTEGDRYQSKYVIRKKVEVDGATLQNASAGTNPQTGEWVVNFEF 281
                G  P GSE       DR     +++K+V V G  L +A  G + Q+ +  V+   
Sbjct: 300 AELGGGPVPFGSEKFL----DRQGRPVIVKKQVLVTGENLTDAQPGFDQQSNQPKVDLTM 355

Query: 282 NTAGANRFAEVTKQNVGRPFAIVLDNK----VISAPVIREPITGGRGQISGNFTAANAND 337
           +  G     +V+++N  +  A+++  K    V++AP I   + G R Q+SG+ T   AND
Sbjct: 356 DAKGGRIMRDVSRENYKKRMAMLIFEKGKGEVLTAPSINGEL-GNRFQVSGSMTVVEAND 414

Query: 338 LSVLLRAGALPAPLKVIEERTVGPDLGADSIRAGLTAVVVGFVMVCIYMIACYGLFGAFA 397
           L++LLRAG+L AP+++I+ERT+GP LGAD+I  G  +V+ GF+ + ++M A Y LFG F+
Sbjct: 415 LALLLRAGSLAAPMEIIQERTIGPTLGADNIEKGFKSVMYGFLAIMVFMCAYYALFGLFS 474

Query: 398 CSALFINLVLTLAALSLLQATLTLPGIAGVLLSLGLAVDANILINERIREETKKGRGVFA 457
             AL +NL+L +A LS+LQATLTLPGIA + L++G+A+D+N+LINER+REE + G    A
Sbjct: 475 SIALAVNLMLLVAILSMLQATLTLPGIAAMALAIGVAIDSNVLINERVREELRNGASPQA 534

Query: 458 SMEAGFSRAYSTIVDSNLTTAIKMALLFVFGTGTIKGFAVTITFGILISMFTATVLVRLM 517
           ++ AG+ RA+ TI+DSN+TT I    L  FG+G ++GFAV    GI+ SMF+A    R +
Sbjct: 535 AIHAGYERAWGTILDSNVTTLIAGIALLAFGSGPVRGFAVVHCIGIVTSMFSAVFFSRGL 594

Query: 518 MVTW 521
           +  W
Sbjct: 595 VNFW 598