Pairwise Alignments

Query, 320 a.a., Hydroxysqualene synthase from Azospirillum sp. SherDot2

Subject, 282 a.a., presqualene diphosphate synthase HpnD from Paraburkholderia sabiae LMG 24235

 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 18/268 (6%)

Query: 53  SGENFPVASRLIPKHLRPHVIAFYRFVRLADDIADDADLEPETKLAYLEALER---ALTS 109
           SG +F +A R++P   R  +   Y F R  DDIA D+DL    + A LE       A  +
Sbjct: 20  SGSSFYLAMRILPPAQRDAMYQVYAFCRAVDDIA-DSDLPRAERAAGLERWRADIDACYA 78

Query: 110 GQAKHAYLKPATDLRE-SLQKTGVSDRHARQILRAFRRDSVGARCHSWSDLL-LYCRFSA 167
           G  + + L+    +    LQ+    D HA  ++     D+    C      L LYC   A
Sbjct: 79  GSPRASLLELTRHIHTFHLQR---EDFHA--MIDGMAMDAAADICAPDEVTLDLYCDRVA 133

Query: 168 NPVGRYLLELHGEGVAAG-PASDALCSALQVLNHLQDAREDWTQLGRCYIPLAWFDEAGI 226
           +  GR  + + G     G   S  L  ALQ+ N L+D  ED  ++ RCY+P       GI
Sbjct: 134 SAAGRLSVRIFGMQEQPGIELSHHLGRALQLTNILRDIDED-AEINRCYLPYELLAREGI 192

Query: 227 SVERLVEVESDARMRAIFDQALEHTDRLLERAAALPGL---IQHRGLRMEAAVILSLAES 283
           +    + +  D  +  +     E   +    A A+       Q +  R+ + V   L + 
Sbjct: 193 ATSNPLTIADDPSLPRVCATLAERAKQHFAAADAIMDAQPRAQVKAPRIMSGVYRVLLDR 252

Query: 284 LSRRLKSRDPMKTRVTLGAHHKLAAVAR 311
              R    D  +T+V+      LA VAR
Sbjct: 253 TLER--GFDIPRTKVSKPKLRMLAIVAR 278