Pairwise Alignments

Query, 298 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 322 a.a., branched-chain amino acid ABC transporter permease from Ralstonia solanacearum UW163

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)

Query: 148 LLARFLGSEFGLAMRATGVNARMARAQGVDTDAHVYAGIALSNALTGLAGALFAQTNGFA 207
           L+A  L S FG  + A   N R AR  G+  + H++    LS    G AGAL+A  N FA
Sbjct: 185 LMAFVLRSPFGHTLIAIRENERRARFLGIPVNRHIWIAFTLSCFFMGFAGALYALLNNFA 244

Query: 208 DVTTGIGTIVVGLAAVIVGETVLPARALAL-ALVGCVAGSILYRLAVQLALSADAIGLQA 266
           D          GL     G+ V+ A    + +  G + G++++ + +Q  LS+    L  
Sbjct: 245 DPR--------GLHYSQSGDFVMMAVMGGMRSFWGPLLGAVVF-VVLQDYLSS----LTV 291

Query: 267 SDLNLVTAVLVAVALILPR 285
           + ++ V  + VA+ L  PR
Sbjct: 292 NWMSFVGMLFVAIVLFFPR 310



 Score = 27.3 bits (59), Expect = 5e-04
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 214 GTIVVGLAAVIVGETVLPARALALALVGCVAGSILYRLAVQ 254
           GT++ G+A  ++G   +  R +  A+V    G + Y +A Q
Sbjct: 96  GTLLGGIAGALLGALSVRRRGVYFAMVTIAFGQVFYYIAFQ 136