Pairwise Alignments

Query, 396 a.a., Ribonuclease D from Azospirillum sp. SherDot2

Subject, 371 a.a., ribonuclease D from Escherichia coli ECOR27

 Score =  184 bits (466), Expect = 5e-51
 Identities = 120/341 (35%), Positives = 188/341 (55%), Gaps = 14/341 (4%)

Query: 3   LITTTDALQAFCQSLAGTEYITVDTEFLREKTYWPQLCLVQVGGPNGAVAIDPLAEGI-D 61
           +ITT DAL + C+++     I +DTEF+R +TY+PQL L+Q+        IDPL  GI D
Sbjct: 1   MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPL--GITD 58

Query: 62  LAPLFALMSDPSVLKVFHAARQDVEIFWHLSGQIPHPLFDTQVAAMVCGFGESVGYETLV 121
            +PL A++ DPS+ K  HA  +D+E+F ++ G++P PL DTQ+ A  CG   S G+ ++V
Sbjct: 59  WSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMV 118

Query: 122 TKLAGARIDKSSRFTDWSHRPLTERQLTYALSDVIHLRPAYEKLKRRLARSGRSHWLEEE 181
            + +G  +DKS   TDW  RPLTERQ  YA +DV +L P   KL      SG      +E
Sbjct: 119 EEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDE 178

Query: 182 MAILTDPATYQVDPESSYLRLKVRTN----KPRFMAILKELAAWREREAQRRDQPRSRIL 237
             ++       V PE ++  +   TN    + R +A L+ LA WR R+A+ RD   + ++
Sbjct: 179 CRLMQMRRQEVVAPEDAWRDI---TNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVV 235

Query: 238 RDEALLEIAAHAPTTVDDLARTRGLGRGFAEGR-QGADVLAAVKGGLDLPDSALPRVEPR 296
           R+E L  +A + P ++ +L     LG   +E R  G  +LA V+    LP+ ALP+    
Sbjct: 236 REEHLWSVARYMPGSLGEL---DSLGLSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLN 292

Query: 297 EEPPPGLQPIVELLRVLLKMKCDENNVAAKLVASSADLEAL 337
               PG +   + ++ L+    + + ++A+L+AS   +  L
Sbjct: 293 LMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQL 333