Pairwise Alignments

Query, 989 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 663 a.a., Chemotaxis protein CheA from Azospirillum sp. SherDot2

 Score =  232 bits (591), Expect = 7e-65
 Identities = 157/471 (33%), Positives = 240/471 (50%), Gaps = 42/471 (8%)

Query: 516 EPVTPDVPVPADAPSLPAVQSAGAPVTAAAPPPPAAPSA--RPAVTAAGGVLRVPGEVID 573
           EPV+      A+   +P    A  PV    P  P A  A  +     A   +RVP E +D
Sbjct: 227 EPVSALPEPGAEQEPVPVPAMAAGPVPPKEPALPKADGAPEKGRAQPAANSIRVPAERLD 286

Query: 574 RFMARIDGMVLLSGDLNATANDLRLESALAGLTERLGAGDPDLRALREAVEHHRRDLLDL 633
             M ++  +V+    L    +D               + D  ++++ E +E         
Sbjct: 287 DLMDQVGELVIAHARLKQLISD---------------SVDLQIKSVTEEIE--------- 322

Query: 634 DTQLSRSVDRLREAALDLRVVPIESLFNQFPRVVRELARGQGKSVRFATEGGEVRIDKSM 693
                R  + LR+  + +R+VP+ESLF +F R+VR+L++  GK V     G E  +DK+M
Sbjct: 323 -----RLSNGLRDITMGIRMVPVESLFGRFRRLVRDLSQELGKDVALTMSGEETELDKTM 377

Query: 694 VEMLYDPLMHMVRNAIDHGIEPAADREAAGKPAQATLSLRAIQRNSRVVVEIVDDGRGIA 753
           +E L DPL+H++RN++DHG+EPAA+R AAGK  Q  + L A    +RV++ I DDGRG+ 
Sbjct: 378 IERLNDPLVHIIRNSLDHGLEPAAERVAAGKAPQGRIHLSARHAGTRVLMTIRDDGRGLD 437

Query: 754 TEAVRAKAVRQGLIGEEDSLHLSPDAVREFIFAPGFSTADTVTETSGRGVGMDVVRTAIT 813
            + +RAKA    LI       LS   + + IF PGFSTA T+T  SGRG+GMDVV+  I 
Sbjct: 438 RDRIRAKAEEHELI--LPGAKLSDAELFQLIFHPGFSTARTLTSVSGRGIGMDVVKRTID 495

Query: 814 RLGGSIAIRTREGAGTAFAIDLPLSAAILRTLLVQVDDQVLAIPDRFVEEVCGFTADDFH 873
            L G+I + +  G GT   + LPL+ AI+  LLV+V      IP   VEE     AD   
Sbjct: 496 GLRGTIEVSSLPGGGTEITLGLPLTLAIIDGLLVRVGQGRYVIPLFAVEECVELPADVER 555

Query: 874 RVSGCWTVMRRKRVLPVVRLADALGFPAEGEWPPSGPGQRLVVVLRQGSRRIGLEIDKLL 933
           R +    +  R  ++P +RL D+          P  P Q+ +V++  G +R+GL +D++L
Sbjct: 556 RHANRNFLNIRGALVPFLRLRDSFAVR-----HPPDPYQK-IVIISSGDKRVGLVVDQVL 609

Query: 934 RRGDLFVRESHPGLAEVPGVGGVSLLNDGRIVIILDGDELYRLAALAQRRE 984
                 ++      A+V    G ++L DG + +ILD   + ++ A  Q +E
Sbjct: 610 GDHQTVIKSMSKLHADVANFSGATILGDGSVALILD---IAQIVAAGQTQE 657



 Score = 43.5 bits (101), Expect = 5e-08
 Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 2/123 (1%)

Query: 13  FGVEAGEHFDLLEKLLSAGPGDGPEAERIAALFRSFHSLKGAARAMDLFAMEAVAHRAET 72
           F  EA E    LE  L        + E +   FR+ H++KG+       A  +  H  E+
Sbjct: 10  FREEAAELLADLESALLHLEQSPTDREPLDTAFRALHTIKGSGSMFGFEAAASFTHHLES 69

Query: 73  ILGRVRSGTLALTEEVAAPLLEALDALRGLAEAGMRDRRDGQAPADLLARLDALGGEGPA 132
              R+R G LA T  +    L A D +R L E       D      +LARL  L G    
Sbjct: 70  AFDRMRKGELAATTAMIGIALAAKDHIRILIEDPA--SADPAVADGILARLADLSGSAAM 127

Query: 133 AKP 135
           + P
Sbjct: 128 SAP 130