Pairwise Alignments

Query, 413 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 712 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Pseudomonas sp. S08-1

 Score =  124 bits (310), Expect = 1e-32
 Identities = 117/422 (27%), Positives = 189/422 (44%), Gaps = 59/422 (13%)

Query: 12  RFGLAVLLPAAAALVPLLLPQA--FPDAAQQTVWLATGGAL--ALALLIDCVLALDLSDA 67
           R+ LA+ LP +A    L   QA     A Q T  +A  G L  AL LL+   +   ++  
Sbjct: 327 RWTLAITLPTSAVFADLQQLQAGLAEQANQDTFGMALVGLLIAALGLLVIWFVGYGIARP 386

Query: 68  MTRLEAAADRLAAGTLDTGMPDPRMSDDASALSVRGDEAGGIAAA----LARVARTQDSL 123
           +  + A  D +A G  D  +   R+  D      R DE G IA+     L ++      +
Sbjct: 387 LKDMAAMLDDIAKGDGDLTV---RLQVD------RADELGQIASGFNTFLNKLQNMIRDV 437

Query: 124 HATLRCLTHEAGGDAPVATPLPGRYGEMAALVEEARASFRNIGQQAAQVAVAAGQASTAV 183
             +++ ++  +   A +A           A +++   +   +   A  VA  A QA+ A 
Sbjct: 438 VTSVQKVSDSSEHTADIAIRTNQGVQRQMAEIDQVATAVHEMTATAQDVARNATQAAEAA 497

Query: 184 SQVADGAAIQTEDLDRVVNAVGRSVRAIADVTDSTRAASDMVRVTAGFADRGKAEMARLV 243
           S  AD +A    D  R+V    +++ A+A                         E+ R V
Sbjct: 498 SH-ADRSA---NDGKRIVEGTAKAISALA------------------------GEIGRAV 529

Query: 244 RVSQTIGDNSRRIGRITEAITQIAVKTNILSVNASIEAARAGEQGKGFEVVAEEVGKLAD 303
            V QT+  +S  I  I  AI  IA +TN+L++NA+IEAARAGEQG+GF VVA+EV  LA 
Sbjct: 530 SVVQTLAKDSENINAILVAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQ 589

Query: 304 NAVES--------------ARQIAEIVEAAAALAEDGMAATAEVVQMMDGIAERVTQIDR 349
              ++               R++  ++E + A  +D +         ++ I + V+ I+ 
Sbjct: 590 KTQQATEEIQSMIQQLQHGTREVVTVMEQSQARTDDSVQQAQIAASALENITQAVSVIND 649

Query: 350 MVQSVAAAMAHQQDHIVEIESNVGNIRTVASKNAAASEEITATMVHLSRLADDTRRLAER 409
           M   +A+A   Q     +I  NV NI  VA++ A  ++E +     L++LA+  RRL  +
Sbjct: 650 MNTQIASAAEEQSAVAEDINRNVTNIGQVAAEVAGGADEASGASAELTKLAEQQRRLINQ 709

Query: 410 FR 411
           FR
Sbjct: 710 FR 711