Pairwise Alignments

Query, 183 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 208 a.a., RNA polymerase sigma factor from Ralstonia solanacearum UW163

 Score = 86.7 bits (213), Expect = 3e-22
 Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 29/191 (15%)

Query: 10  PDMSPPDID--------DRAIASHVPRLRRYATALVGNRPDADDLVQDCVEKALANRHAL 61
           PD+  P +D         +A+  HV      A  L G+  DADD+VQD   +A       
Sbjct: 2   PDLPDPTVDMPTEAQRFAQAVLPHVDAAYNLARWLTGDAQDADDVVQDACLRAFRLFGGF 61

Query: 62  RDPSKLGG----WLMTILHNLHISSQRGRRRRGAEVPVEELADDL------ALSAPPADR 111
           R     GG    WL+ I+ N   S +  RRR+    P ++ AD L      A  A PA  
Sbjct: 62  R-----GGDGRPWLLAIVRNTWFS-ECARRRQVHTQPWQDDADQLPADDLAAYGADPAAL 115

Query: 112 GAVRDFVR----AFAQLTDEHRTILLLTGMEGLSYREVAEVLELPIGTVMSRLARAREKL 167
            A  D VR    A A+L   +R +L+L  +E L YR++A ++++P+GTVMSRLARAR++L
Sbjct: 116 LARADDVRRMQAALARLPVAYREVLVLRELEDLPYRDIAAIVDVPVGTVMSRLARARQQL 175

Query: 168 -RVLLDGGTQQ 177
            R+L +G T +
Sbjct: 176 ARLLTEGDTPE 186