Pairwise Alignments

Query, 183 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 167 a.a., RNA polymerase sigma-54 factor RpoN from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  126 bits (317), Expect = 2e-34
 Identities = 70/161 (43%), Positives = 101/161 (62%), Gaps = 2/161 (1%)

Query: 18  DDRAIASHVPRLRRYATALVGNRPDADDLVQDCVEKALANRHALRDPSKLGGWLMTILHN 77
           DD ++ S VPRLRRY+ ALV NR DADDLVQD +E+A A  +     + +  WL +I+HN
Sbjct: 3   DDASLLSWVPRLRRYSRALVNNRDDADDLVQDTLERAWAKSNLWGGVADMRAWLFSIMHN 62

Query: 78  LHISSQRGRRRRGAEVPVEELADDLALSAPPADRGAVRDFVRAFAQLTDEHRTILLLTGM 137
           LH+     RR R   V +++   ++ ++    DR AV D   A   L  E + +LLL  +
Sbjct: 63  LHVDGV--RRPRLHTVTMDDDTPEVPVAPTQTDRLAVLDLQAALDLLPVEQKEVLLLVTL 120

Query: 138 EGLSYREVAEVLELPIGTVMSRLARAREKLRVLLDGGTQQV 178
           E ++Y +VA+ L +PIGTVMSRL+R RE+LR L++G  + V
Sbjct: 121 EDMAYADVAQALGIPIGTVMSRLSRGRERLRGLMEGRAEPV 161