Pairwise Alignments

Query, 1046 a.a., Multidrug resistance protein MdtB from Azospirillum sp. SherDot2

Subject, 1039 a.a., Multidrug resistance protein MdtC from Azospirillum sp. SherDot2

 Score =  564 bits (1453), Expect = e-164
 Identities = 348/1052 (33%), Positives = 570/1052 (54%), Gaps = 24/1052 (2%)

Query: 1    MPITRISVDNPVFATMMMVALMVLGLFSYNRLGVDLFPDVDFPVVVVSTAYPGASPETVE 60
            M ++ + +  PV   ++  AL++ GL +Y +L     P VDFPVV V+   PGASPET+ 
Sbjct: 1    MNLSELCIRRPVMTILLTAALVLSGLAAYRQLPTAALPRVDFPVVSVTATLPGASPETMA 60

Query: 61   TDITRPVEDAINTIAGIKTLTSRSYEGQSVVIAEFDLKTSSVQALQDVREKVSAIRATFR 120
              +  P+E   +TIAGI T+TS S  G + +  +F L+     A  DV+  ++  +    
Sbjct: 61   ASVASPLEREFSTIAGIDTITSNSTLGNTSITIQFVLERDIDAAAADVQAAIARTQRRLP 120

Query: 121  DEVKDPQITR-FNPDDQPILSIAVTSDLRSLRDLTTLTDQIILKRLQNVRGVGKATIAGG 179
             E+  P   R  NP DQPIL +++ S    L  L  + + +I  ++  + GV +  I G 
Sbjct: 121  AEMTTPPSYRKVNPADQPILFLSLNSPTLPLAQLNDIAETLIQPKVATLPGVAQVQIYGS 180

Query: 180  VKRQILVRLKPEKLEALNVGVDEVIATVTGENQDVPAGTVSGQGRERVVQVEGRVRNPRD 239
             K  + V++ P  L    +G+DE+   +   N + P GT++GQ ++ V+    ++ +   
Sbjct: 181  QKYAVRVQVNPNALALRGIGIDELQKALAAANANTPVGTLTGQQQQLVIAANPQLPDAAA 240

Query: 240  LLDLIVARRGNSPVRLAQVAEVIDGQEEQDSAALLNGNPALAVDVVKVQGANTVEVARGL 299
               LIVA R ++PVRL  VA+V+D  E   +A+ LNG  ++ + V +   ANTV+V   +
Sbjct: 241  FRQLIVAYRNSAPVRLGDVAQVLDSVENDRTASWLNGTRSIMLAVQRQPDANTVDVVDRV 300

Query: 300  HAAIQDLRTNGSLPADVTLAVVRDSSRGITNSLSNVQETLVEGGILTILIVMVFLGSWRS 359
               +   +T   LPA   + VV D S  I  ++ +VQ TL    +L ++++ +FL    +
Sbjct: 301  RELVPVFQTQ--LPAAAAIQVVNDRSESIRQAVEDVQFTLGLTIVLVVMVIFLFLRRLSA 358

Query: 360  TVITALTLPVAVLGTFGMLAAMGFTLNMMTLMALSLAIGILIDDAIVVRENIMRHLARGQ 419
            T+I AL +P++++ T G +  +GF+++ ++LMAL+LA+G+++DDAIV+ ENI+R++  G 
Sbjct: 359  TLIPALAVPISLIATAGGMHLLGFSVDNISLMALTLAVGLVVDDAIVMMENIVRYVEEGM 418

Query: 420  GHRQAALDGTAEIGLAVLATTLTIVAVFLPVAFMGGIIGRFFLQFGITVSAAVLISLFVS 479
               +AA+ G+ EIG  +L+ TL++VAVF+P+  MGG++GR F +F + V+ ++  S FVS
Sbjct: 419  KPFEAAIKGSREIGFTILSITLSLVAVFIPILLMGGVVGRLFHEFALVVTMSIGASAFVS 478

Query: 480  FTLDPMLSSIWYDPAAHGRHGRSIFGRFAAWFERGFDSVSHGYGRLLRWGLRRRWVVVVV 539
             TL PM+ S +   A   + G   FGR     E GF +V +GY R LRW LR R ++ +V
Sbjct: 479  LTLTPMMCSRFLTHAHDQKEG--WFGRM---LEGGFSAVLNGYARTLRWTLRHRPLMGLV 533

Query: 540  ALAIFFGSFLLVPRIGVEFVPAADLGEQIVEVESPVGSSLATTTAKTRQVEAAIREFPEI 599
             +    G+ LL   I   F P  D+G+  V  E+    +  +   + +QV A I+  P +
Sbjct: 534  MIGTVIGTALLYQAIPKGFFPTEDIGQIQVTTEARADIAFPSMAERQQQVAAIIKANPAV 593

Query: 600  AYTYSTVNTGVSIGHNRGSIYLRYTPIDQRKRSPNDLAPLLRQRLSAIPGVTI---GIAI 656
                S+V  G S G N+G ++L   P D+R  S  ++   +R++++ IPG+ +    +  
Sbjct: 594  VDVISSVGVGGSTG-NQGRMFLTLKPRDERP-SATEVIQQIRRQVNGIPGMAVYMQPVQN 651

Query: 657  PGVGG--VQKQIQVSVQGRDIAELDRLSQTVIGAMRAIPGFVDVDSTLKAAKPTLAVRLE 714
              +GG   +   Q ++QG D+ EL + S  +   +R IP   DV S L+   P   V ++
Sbjct: 652  LRIGGRASKSLYQYTIQGLDLDELYQWSGRLEQTLRGIPILQDVTSDLQLNNPQAYVHID 711

Query: 715  RDLASDLGIGTAKVADTLRPLFAGDTVSSWKAPDGESYDVLVRLPEGDRAGRADLDRIHF 774
            R+ A+ LG+G  +V  TL   F    VS+   P  + Y VL+ L    +   + L RI+ 
Sbjct: 712  REKAATLGLGVDQVRSTLYSAFGQRQVSTIYTPSND-YQVLIELEPKYQGDDSSLSRIY- 769

Query: 775  SGGVDANGTPRMIPLSQVAEVVTTLGASQINRRDLQREVNVQANV-QGRAAGDAGRDLQA 833
               V +  T +++PL   A V  T G   +N +     V +  N+  G + G A   ++A
Sbjct: 770  ---VRSTTTGKLVPLDAFARVERTAGPLAVNHQGQLPAVTLSFNLAPGASLGQAVDLIRA 826

Query: 834  ALAKIELPPGYRIVFGGSTKDIAETSGYAMQALALAVILIYLILASQFGSFLQPLAIMAS 893
            +  ++ LPP     F G+ +   +        L+ AV++IY++L   + SF+ PL I++ 
Sbjct: 827  SEREMGLPPTVTTGFAGTAQVFQDAQAGQALLLSAAVLVIYIVLGVLYESFIHPLTILSG 886

Query: 894  LPLSLVGVFLGLLTAGSTLNIFSAIGFIMLMGLVTKNAILLVDFANQARKRGASLHDALV 953
            LP + +G    L+     L++ + IG +ML+G+V KNAI+++DFA  AR+ G S  DA+ 
Sbjct: 887  LPSAAIGALATLMLFDVELSVIAIIGILMLIGIVKKNAIMMIDFAVDARRNGMSARDAIE 946

Query: 954  EAGIIRLRPIVMTTAAMIFGMLPLALGIGEGAQQRAPMAHAVIGGLLSSTILTLLVVPVA 1013
            +A ++R RPI+MTT A I G LP+A+  G  A+ R P+  AV+GGL  S +LTL + P  
Sbjct: 947  QACLLRFRPIIMTTMAAIMGTLPIAIAHGAAAELRQPLGLAVVGGLCVSQVLTLYITPSL 1006

Query: 1014 LTYLDGLSRRMKRWFAHSDPDAQQHPAGQHPA 1045
              Y++     M   F     D    P G  PA
Sbjct: 1007 YLYMEDFGHFMSNLFRSRKADI---PHGPMPA 1035