Pairwise Alignments

Query, 827 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 564 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

 Score =  244 bits (623), Expect = 1e-68
 Identities = 156/375 (41%), Positives = 214/375 (57%), Gaps = 11/375 (2%)

Query: 338 DYEGALEDFRWHLVFAVAAGLAVLLGAVFCGLLLLRTVCRPLAAFSVDFDAIARNDQTHT 397
           D + A  +F      A AA +AVL   V    L+ R + R L        A+A  D   T
Sbjct: 182 DIDAAYHEFLTRTGAATAALIAVL---VLIAFLVNRDIVRSLHRLRDKMTALAAGDMGVT 238

Query: 398 IDLPAAAEFHPIAGQLRGLK-----ARLCYAVQ-ERVERARHADEERRRALETMASTVER 451
              P A   + I G  + L+     A+   +++  + E+A  A  E+R A+  +AS  E+
Sbjct: 239 F--PEATRRNEIGGMTQALQVFKENAQAKASLEASQAEQAERAAAEKREAMTMLASHFEQ 296

Query: 452 EAGRAVEEVAQRTGAMADDAEGMSGSAERVSVNAQTVASAAGQALANAQTVAAASEELAA 511
             G  + +VA    A+   A+ M+ +A+     A  V +A  Q  AN QTVAAA+EEL +
Sbjct: 297 TVGNLIHDVAGEADAIERRAQDMTRAADETGRLAGAVTAATEQTSANVQTVAAATEELTS 356

Query: 512 SIREISSQVAHSSAVTRRAVESGHHTQATIRSLSETVAKVGEVVNLIQSIAGQTNLLALN 571
           SI EIS QV  S+ + R AVES       +  L+  V ++G VV LI SIA QTNLLALN
Sbjct: 357 SINEISRQVGSSAEIAREAVESAERANGKVEGLAGAVERIGAVVGLINSIASQTNLLALN 416

Query: 572 ATIEAARAGEAGKGFAVVAQEVKNLANQTASSTEEITRQITAIQAVTDEAVQAVEEIGRT 631
           ATIEAARAGEAG+GFAVVA EVK LANQTA +TEEI  Q+ AIQ  T +AV+ + ++ + 
Sbjct: 417 ATIEAARAGEAGRGFAVVANEVKALANQTAQATEEIATQVAAIQGETTQAVREIRDVAQV 476

Query: 632 IAEIDHIAGSIAAAMEQQSAATQEISRNVVETSTAAQEVSYRIAAVSEEADRTGEQATHV 691
           I  ++ +A SIA+A+EQQ AAT+EISRN+ + +  + EVS  I  V+E A R G  A  V
Sbjct: 477 IGRVNDVATSIASAVEQQGAATREISRNIQQAARGSHEVSSSIGGVNEAAGRNGTVAYEV 536

Query: 692 KNGSGDVARSIESLR 706
                +++   ESLR
Sbjct: 537 LENVRELSMQTESLR 551



 Score = 47.0 bits (110), Expect = 3e-09
 Identities = 75/318 (23%), Positives = 124/318 (38%), Gaps = 46/318 (14%)

Query: 423 AVQERVERARHADEERRRALETMASTVEREAGRAVEEVAQRTGAMADDAEGMS--GSAER 480
           A  E + R   A       L  +A  V R+  R++  +  +  A+A    G++   +  R
Sbjct: 186 AYHEFLTRTGAATAALIAVLVLIAFLVNRDIVRSLHRLRDKMTALAAGDMGVTFPEATRR 245

Query: 481 VSVNAQTVASAAGQALANAQTVAAASEELAASIREISSQVAHSSAVTRRAVES-GHHTQA 539
             +   T      QAL   +  A A   L AS  E   Q   ++A  R A+     H + 
Sbjct: 246 NEIGGMT------QALQVFKENAQAKASLEASQAE---QAERAAAEKREAMTMLASHFEQ 296

Query: 540 TIRSLSETVAKVGEVVNLIQSIAGQTNLLALNATIEAARAGEAGK--GFAVVAQEVKNLA 597
           T+              NLI  +AG+ + +   A      A E G+  G    A E  +  
Sbjct: 297 TVG-------------NLIHDVAGEADAIERRAQDMTRAADETGRLAGAVTAATEQTSAN 343

Query: 598 NQT-ASSTEEITRQITAIQ----AVTDEAVQAVEEIGRTIAEIDHIA------GSIAAAM 646
            QT A++TEE+T  I  I     +  + A +AVE   R   +++ +A      G++   +
Sbjct: 344 VQTVAAATEELTSSINEISRQVGSSAEIAREAVESAERANGKVEGLAGAVERIGAVVGLI 403

Query: 647 EQQSAATQEISRNVVETSTAAQEVSYRIAAVSEE--------ADRTGEQATHVKNGSGDV 698
              ++ T  ++ N    +  A E     A V+ E        A  T E AT V    G+ 
Sbjct: 404 NSIASQTNLLALNATIEAARAGEAGRGFAVVANEVKALANQTAQATEEIATQVAAIQGET 463

Query: 699 ARSIESLRQVLVRIVRTS 716
            +++  +R V   I R +
Sbjct: 464 TQAVREIRDVAQVIGRVN 481