Pairwise Alignments

Query, 444 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 613 a.a., L,D-transpeptidase from Serratia liquefaciens MT49

 Score =  172 bits (436), Expect = 3e-47
 Identities = 104/308 (33%), Positives = 157/308 (50%), Gaps = 8/308 (2%)

Query: 95  PADKVSEVFTTDIDRAVKAFQLAQRMKPDGLIGAGTRAALDRTPAEAAALMRQSAVAMRS 154
           P       +T D+   VK FQ  Q +  DG+IG  TR  L+ TP   A+L+  +   +R 
Sbjct: 306 PVTVTDNRYTADLVEGVKRFQKWQGLSADGVIGVRTREWLNVTPQMRASLLALNIQRLRI 365

Query: 155 FRDTAPDNILVVNLTNQTTTLVRGGEEELTMRAIVGRPSRETPLLTDRITHVIVNPTWTV 214
                 D  ++VN+ N + T    G E L+ R IVGRPSR+TPL+   + +V+VNP W V
Sbjct: 366 LPGRV-DTGIMVNIPNYSLTYYLNGNEVLSSRVIVGRPSRKTPLMNSALNNVVVNPPWNV 424

Query: 215 PPTVLKEDKLPNLRAKGTPGIQNAIVYLDG-----QEVAPETVDWHDVTPGRV--RIVQQ 267
           P T+++ED +P     G+   ++    L G     + + P  +DW+ V+      RI Q 
Sbjct: 425 PTTLVREDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWNMVSARNFPYRIRQA 484

Query: 268 PGDHNALGRFRFNLTNPYDIYLHGTNEPRLFARELRSISSGCVRLEDPRKLAELLLQGTS 327
           PG  N+LGRF+FN+ +   IYLH T    LF +++R++SSGCVR+     LA +LLQ   
Sbjct: 485 PGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLLQDAG 544

Query: 328 VTPERIDRLLSKQQPQWVKLAAPMPVQFVYWIATVEADGAVRLHPDIYDRLDDAPAAMSV 387
               R+   L +    +V +   +PV+  Y  A V  DG  +   DIY+  D   +   +
Sbjct: 545 WNNTRVSSTLKQGNTTYVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDTVRSGAQI 604

Query: 388 PAPQPGLL 395
            A    L+
Sbjct: 605 LAQAEKLM 612