Pairwise Alignments

Query, 444 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 562 a.a., L,D-transpeptidase from Dickeya dianthicola ME23

 Score =  165 bits (417), Expect = 4e-45
 Identities = 103/299 (34%), Positives = 156/299 (52%), Gaps = 13/299 (4%)

Query: 106 DIDRAVKAFQLAQRMKPDGLIGAGTRAALDRTPAEAAALMRQSAVAMRSFRDTAPDNILV 165
           D+  AVK FQ +Q ++ DG+IG  TR  L+ +    A L+  +   +R   D     I V
Sbjct: 266 DVVEAVKRFQHSQGLQDDGVIGKRTRDWLNVSSQMRATLLALNIQRLRLVPDKVSSGI-V 324

Query: 166 VNLTNQTTTLVRGGEEELTMRAIVGRPSRETPLLTDRITHVIVNPTWTVPPTVLKEDKLP 225
           VN+ N + +  + G E L+ + IVG+P R+TPL+   +++V++NP W VP T+ ++D +P
Sbjct: 325 VNIPNYSLSYYQNGAEILSSKVIVGQPKRKTPLMNSSLSNVVMNPPWNVPTTLTRQDIIP 384

Query: 226 NLRAKGTPGIQNAIVYL-------DGQEVAPETVDWHDVTPGRV--RIVQQPGDHNALGR 276
            +     PG      Y          Q + P  +DW  V+      R+ Q PGD N+LGR
Sbjct: 385 KVIQD--PGYLQRHGYTVLSDWTESAQPIDPSMIDWPMVSASNFPYRLRQAPGDRNSLGR 442

Query: 277 FRFNLTNPYDIYLHGTNEPRLFARELRSISSGCVRLEDPRKLAELLLQGTSVTPERIDRL 336
           ++FN+ N   IYLH T    LF +++R++SSGCVR+    +LA LLLQ       RI   
Sbjct: 443 YKFNIPNTDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASELAGLLLQDAGWNNARISST 502

Query: 337 LSKQQPQWVKLAAPMPVQFVYWIATVEADGAVRLHPDIYDRLDDAPAAMSVPAPQPGLL 395
           L +    +V +   +PV F Y  A V  DG  +   DIY+  DD     ++   + GLL
Sbjct: 503 LEQGNTTYVAVRQRVPVNFYYLTAWVSDDGKPQFRTDIYN-YDDTVKIGALALSKVGLL 560