Pairwise Alignments

Query, 562 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 795 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  293 bits (750), Expect = 2e-83
 Identities = 175/376 (46%), Positives = 239/376 (63%), Gaps = 1/376 (0%)

Query: 186 TSSLWTMAVVVGGLALPVVALIALVGNSISRRIRRLSDSMRSLADGNLSTVIPETDSGDE 245
           T+    ++V+  G A+ VV +  L+  SI   I  ++  M  LA  NLS  +P TD GDE
Sbjct: 281 TAGRMMLSVMASGFAIMVV-IGTLIARSIYGPITAMTGVMGELAGDNLSVTVPFTDRGDE 339

Query: 246 LGDMGRAVQVFRVNAEDSRRLEAEQAEANRQAEAEKRQSMDRLAARFEGTVGGMIRSVST 305
           LG M ++V  F+      R+LEA Q E  R+AEA++  +M +LA  FEG+VG +I +V++
Sbjct: 340 LGGMAKSVGHFKDQLIRVRQLEAAQEEQKRRAEADRLAAMRKLADTFEGSVGKVIETVTS 399

Query: 306 TTEALGQKVRAMSQAAEQTSQLAGIVASASDDTAANVQTVAAASEELTGSIVEIGRQVSE 365
               L      M+  A +TS  A  VASA+   + NVQTVA+A+EEL  SI EI  QV  
Sbjct: 400 AATELEAASGQMAGTATETSSQATTVASAAQQASTNVQTVASATEELASSIKEIAHQVER 459

Query: 366 ASRVAGEAVGMAQEATGRISSLAEAVERIGTVVGLINSIAGQTNLLALNATIEAARAGEA 425
           +  V+  A   A   T ++ +L+  V +IG +V LIN IA QTNLLALNATIEAARAGEA
Sbjct: 460 SQAVSHHAGDEAHTTTMQVQALSANVGKIGEIVKLINDIASQTNLLALNATIEAARAGEA 519

Query: 426 GKGFAVVASEVKALANQTAKATDEIGGQMSGIQTVTGQAVTEIQKVAAVIERLSGIATAI 485
           GKGFAVVA EVK LANQTAKAT EI GQ+  +Q  T  AV  I+ ++ VI  +  I++A+
Sbjct: 520 GKGFAVVAGEVKDLANQTAKATSEIAGQIQAVQDSTRVAVHAIESISKVIAEMGEISSAV 579

Query: 486 SAAVEQQNAATAEITRSVQQAAAGTGEVSSSISGVTAASDESGRTARELVDALGKLTSEA 545
           +AAVEQQ AAT EI R+V+QAA GT EV+ +I  V  A+ E+G+ A ++ ++ G+L+ +A
Sbjct: 580 AAAVEQQTAATGEIARNVEQAAEGTQEVTRNIVSVEQAAKETGQAAEQIRESSGELSRQA 639

Query: 546 AGLNAQVGDFLATVRA 561
             L  +VG FL  VR+
Sbjct: 640 EFLRHEVGQFLIQVRS 655