Pairwise Alignments

Query, 562 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 810 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  293 bits (751), Expect = 1e-83
 Identities = 171/363 (47%), Positives = 237/363 (65%), Gaps = 1/363 (0%)

Query: 200 ALPVVALIA-LVGNSISRRIRRLSDSMRSLADGNLSTVIPETDSGDELGDMGRAVQVFRV 258
           AL + AL+A L+  SISR I  ++  M  L+  NLS  +P  D GDE+G M ++V  F+ 
Sbjct: 308 ALILGALVAWLITRSISRPINAMTGVMNELSGNNLSVDVPYADRGDEIGAMAKSVGHFKN 367

Query: 259 NAEDSRRLEAEQAEANRQAEAEKRQSMDRLAARFEGTVGGMIRSVSTTTEALGQKVRAMS 318
                 +LEAEQ E  ++AEA++  +M ++A  FE +VG +I +V++    L      MS
Sbjct: 368 QLMRVHQLEAEQEEQKKRAEADRMTAMRKMADTFEESVGKVIETVTSAATELQAASSQMS 427

Query: 319 QAAEQTSQLAGIVASASDDTAANVQTVAAASEELTGSIVEIGRQVSEASRVAGEAVGMAQ 378
             A +TS  A  VA+++   +ANVQTVA+A+EEL  SI EI  QV  +  V+  A     
Sbjct: 428 GTATETSAQATTVATSAHQASANVQTVASATEELAASIREIAHQVERSQAVSAHAGQEVN 487

Query: 379 EATGRISSLAEAVERIGTVVGLINSIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKA 438
             T ++ +L+E+V +IG +V LIN IA QTNLLALNATIEAARAG+AGKGFAVVA+EVK 
Sbjct: 488 TTTSQVRALSESVSKIGEIVNLINDIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKH 547

Query: 439 LANQTAKATDEIGGQMSGIQTVTGQAVTEIQKVAAVIERLSGIATAISAAVEQQNAATAE 498
           LANQTA+AT EI GQ+  +Q  T  AV  I  +++VI  +  I++A++AAVEQQ+ AT E
Sbjct: 548 LANQTARATSEIAGQIQAVQDGTNAAVHAIDAISSVIGEMGEISSAVAAAVEQQSGATTE 607

Query: 499 ITRSVQQAAAGTGEVSSSISGVTAASDESGRTARELVDALGKLTSEAAGLNAQVGDFLAT 558
           I R+V+QAA GT EVSS+I+ V  A+ E+G  A ++ D+   L+ +A  L  +VG FLA 
Sbjct: 608 IARNVEQAATGTEEVSSNITSVEQAARETGAAAEQIKDSSADLSRQAEFLRHEVGQFLAQ 667

Query: 559 VRA 561
           VRA
Sbjct: 668 VRA 670