Pairwise Alignments

Query, 562 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 681 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  290 bits (741), Expect = 2e-82
 Identities = 166/375 (44%), Positives = 243/375 (64%), Gaps = 3/375 (0%)

Query: 189 LWTMAV-VVGGLALPVVALIALVGNSISRRIRRLSDSMRSLADGNLSTVIPETDSGDELG 247
           LW   + V+GGL +   A   ++   I+  I  ++++M  LA G+ +  +   D   E G
Sbjct: 309 LWGQIIAVIGGLGITFAAA-GILAKGITGPIAHITNAMSRLATGDTAISVEGVDLPTEEG 367

Query: 248 DMGRAVQVFRVNAEDSRRLEAEQAEANRQAEAEKRQSMDRLAARFEGTVGGMIRSVSTTT 307
           +M RAVQVFR N   + +L AEQ +A ++A+  +RQ+++RL A F   V G + +V   T
Sbjct: 368 EMARAVQVFRNNHLAAEKLAAEQ-KAEQEAKERRRQAIERLTAAFRQEVSGALAAVGDAT 426

Query: 308 EALGQKVRAMSQAAEQTSQLAGIVASASDDTAANVQTVAAASEELTGSIVEIGRQVSEAS 367
             L     ++  +A+     A  VA+A+++ + NV+TVA A+EEL+ SI EI RQV+ ++
Sbjct: 427 RLLNNSANSLGSSAQSMEGHAAAVAAAAEEASINVETVAGAAEELSASINEISRQVATSA 486

Query: 368 RVAGEAVGMAQEATGRISSLAEAVERIGTVVGLINSIAGQTNLLALNATIEAARAGEAGK 427
           +V+ +AV  A+     +  LA+A   IG VV +I  IAGQTNLLALNATIEAARAGEAGK
Sbjct: 487 QVSKQAVAEAERTNALVHGLADAARNIGEVVTMIGDIAGQTNLLALNATIEAARAGEAGK 546

Query: 428 GFAVVASEVKALANQTAKATDEIGGQMSGIQTVTGQAVTEIQKVAAVIERLSGIATAISA 487
           GFAVVA+EVK LA QTA+AT +I  Q+  +Q  T QAVT IQ + A+IER++ +++AI+A
Sbjct: 547 GFAVVANEVKHLATQTARATSQITEQVGAVQAATDQAVTAIQGIGAIIERINEVSSAIAA 606

Query: 488 AVEQQNAATAEITRSVQQAAAGTGEVSSSISGVTAASDESGRTARELVDALGKLTSEAAG 547
           AVE+Q+A T +I R+V +AA GT EVS  +S VT+ + E+G+TA +++ A+  L S++  
Sbjct: 607 AVEEQDATTRDIARNVAEAAGGTREVSRHVSDVTSEAGETGKTATDVLGAVTALGSQSDA 666

Query: 548 LNAQVGDFLATVRAA 562
           LN  V  FLA V  A
Sbjct: 667 LNTSVQRFLAGVETA 681