Pairwise Alignments

Query, 259 a.a., Ribosomal RNA small subunit methyltransferase E from Azospirillum sp. SherDot2

Subject, 239 a.a., 16S rRNA m(3)U-1498 methyltransferase from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  103 bits (257), Expect = 3e-27
 Identities = 81/248 (32%), Positives = 124/248 (50%), Gaps = 23/248 (9%)

Query: 7   TRLYVDSPLAEGQSVGLDHERAHFLRHVLRLDRGDSVAVFNGRDGEWRAVIDGFGKGWCS 66
           +R + ++PL+ G+   L   +AH++  VLR+  GD++ +F+G   E+R  +   GK    
Sbjct: 4   SRFFTETPLSLGEHE-LPEAQAHYISRVLRMTEGDALQLFDGSGQEFRGTLLEVGKKRVH 62

Query: 67  LTVAEQRREQDTTPDLWLVFAPLKKG-RIDFVAEKATEMGVSRLWPVFTRRTDPNRVNLD 125
           + + E    Q  +     +   L +G R+D+  +KATE+GVS + P+ + R +   V L 
Sbjct: 63  VQLTESFAGQVESGLRIHLGQGLSRGERMDWAIQKATELGVSEITPIVSERCE---VRLK 119

Query: 126 RLRAN---------AVEAAEQCERLSVPEMGEAVPLDRALAGWPADRRLYLCAEAGAARP 176
             RA          A+ A EQC R  VP +   +PL   +    AD +L L        P
Sbjct: 120 DERAEKRQAHWQQIAISACEQCGRSVVPVIHAPMPLAEWIKHTEADLKLVL-------HP 172

Query: 177 VAEVLRD-APPGPAALLVGPEGGFDQSELDELAKLPFVVPVGLGPRILRADTAVVAALAC 235
           VAE L     P   A L+GPEGG + +E+ +     F     LGPR+LR +TA V AL+ 
Sbjct: 173 VAEPLTSHDKPASLAFLIGPEGGLNDAEVTQAQDAGFHA-ARLGPRVLRTETAPVVALSV 231

Query: 236 WQSLAGDW 243
            Q L GD+
Sbjct: 232 AQQLWGDF 239