Pairwise Alignments

Query, 259 a.a., Ribosomal RNA small subunit methyltransferase E from Azospirillum sp. SherDot2

Subject, 242 a.a., RNA methyltransferase, RsmE family from Kangiella aquimarina DSM 16071

 Score = 78.2 bits (191), Expect = 1e-19
 Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 8   RLYVDSPLAEGQSVGLDHERAHFLRHVLRLDRGDSVAVFNGRDGEWRAVIDGFGKGWCSL 67
           R++    L     + L+ E  + +  VLR+  G  + +FNG    +   I    +   S+
Sbjct: 5   RIFTTQQLTPSSELLLEKEAGNHVSRVLRMTVGQQLELFNGDGNSYFCNILSVERNQVSV 64

Query: 68  TVAEQRREQDTTPDLWLVFAPLKKG-RIDFVAEKATEMGVSRLWPVFTRRTDPNRVNLDR 126
            + E +   + +P    ++  + +G +++   +K  E+GV +  P+ T R     V LD 
Sbjct: 65  HIVESKSSNNESPLNIHLYQGVSRGDKMELTLQKGVELGVKQFTPLITERCG---VKLDD 121

Query: 127 LR--------ANAVEAA-EQCERLSVPEMGEAVPLDRALAGWPADRRLYLCAEAGAARPV 177
            R           +E+A EQC R ++P +   + L  AL    A+   ++  EA      
Sbjct: 122 KRWQKKHEHWQKVIESACEQCGRNTIPILHPVIKLQAALTHLNANS-FFMHPEAKTGFKS 180

Query: 178 AEVLRDAPPGPAALLVGPEGGFDQSELDELAKLPFVVPVGLGPRILRADTAVVAALACWQ 237
                D+      L VGPEGGF   E+  +       PV LGPR+LR +TA +AA+A   
Sbjct: 181 ISANIDSE---IQLWVGPEGGFSDEEISSVTAHG-CNPVQLGPRVLRTETAALAAVAVMN 236

Query: 238 SLAGDW 243
           S+ GD+
Sbjct: 237 SVWGDF 242