Pairwise Alignments

Query, 422 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 684 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  233 bits (595), Expect = 1e-65
 Identities = 156/416 (37%), Positives = 230/416 (55%), Gaps = 34/416 (8%)

Query: 5   VALAALLAADLLQMGGLALRAGLAVAGLAALGGALLYLHRAGAAVDRLTRVNRAVAAGDF 64
           +ALA+ +++D   + G  +   LA A +A L  A   + +  +A+  L      ++A DF
Sbjct: 298 LALASQVSSDARGVLGATIFGVLAAAAVA-LAVAWAVVRQMTSAIGSLVGTMERLSANDF 356

Query: 65  EARVIGIREGGALGELMHATNDAIDRTDAFVREATASMHAVSEHKYFRRIVLRGMQGGFL 124
              V G   G  +G        A+ R+    ++A    H ++E +               
Sbjct: 357 SVIVGGTERGDEMG--------AMARSVQIFKDAMLRGHDLAEQQL-------------- 394

Query: 125 HASRTINAATESISQKVAGFA--GVTQRFEGQIQSVCSEVADTAHRLEVSARTMETDATQ 182
                     ++ S++  G A   +  RF+G  + +   V+  A +L+ +A  M   A+ 
Sbjct: 395 ---------ADAHSREARGHAIEALVNRFQGSAERMVEAVSSAAQQLQGTASAMSDAASD 445

Query: 183 ATGKASSVAASAAQTGSNVGSVAAATEELSASIADISRQIGDVARVAETAVGEAERSNAL 242
            +G+A++VA +     +NV +VAAA EEL++SI +I RQ+   A ++  AV EA  +   
Sbjct: 446 TSGRATTVAGATELASANVQTVAAAAEELTSSIQEIGRQVHRSAEISGAAVSEAGEAQGT 505

Query: 243 VGTLSGAARTVGDVVTLINDIASQTNLLALNATIEAARAGEAGKGFAVVAQEVKRLADQT 302
           V  L+   + +G+VV LINDIA+QTNLLALNATIEAARAGEAGKGFAVVA EVK LA QT
Sbjct: 506 VTGLASMVKKIGEVVILINDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLATQT 565

Query: 303 AKATGDIAAQISAIQSSTDEAVTSIVGIGHTIQSINRIAAGISAGIEQQGSAVREIVVNM 362
           A+AT +I  QISA+Q  T++ V +I  I   I+ +  I AGI++ +E+Q +A +EI  ++
Sbjct: 566 ARATDEIGQQISAVQQQTEKVVLAIGDIVAIIREVGEITAGIASAVEEQSAATQEIARSV 625

Query: 363 EQAAAGTRAVSDDIRDVTDAAGRTSGTAHEVFAASGRMAAEADRLTREVQHFLDEM 418
           EQAAAGT  VS ++  V DAA RT   A EV  AS  M  EA RL   +  FL E+
Sbjct: 626 EQAAAGTTEVSANVGGVQDAANRTGFAAAEVLDASRIMGEEAARLRLTINGFLGEI 681



 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 72/280 (25%), Positives = 109/280 (38%), Gaps = 50/280 (17%)

Query: 168 RLEVSARTMETDATQATGKASSVAASAAQTGSNVGSV------AAATEELSASIADISRQ 221
           ++E    T+++ ATQ   +   +   +  TG NVG V      AAATE ++       R 
Sbjct: 235 QVEFYRSTLDSPATQTVDRMRKIGLESTATG-NVGDVTGPAWFAAATERINLLKTVEDRM 293

Query: 222 IGDVARVAETAVGEAER--SNALVGTLSGAA-------RTVGDVVTLINDIASQTNLLAL 272
             DV  +A     +A       + G L+ AA         V  + + I  +      L+ 
Sbjct: 294 AADVLALASQVSSDARGVLGATIFGVLAAAAVALAVAWAVVRQMTSAIGSLVGTMERLSA 353

Query: 273 NATIEAARAGEAGKGFAVVAQEVKRLADQTAKATGDIAAQISAIQSSTDEAVTSIVGIGH 332
           N         E G     +A+ V+   D   +   D+A Q  A   S +         GH
Sbjct: 354 NDFSVIVGGTERGDEMGAMARSVQIFKDAMLRGH-DLAEQQLADAHSREAR-------GH 405

Query: 333 TIQS-INRIAAGISAGIEQQGSAVR--EIVVNMEQAAAGTRAVSDDIRDVTDAAGRTSGT 389
            I++ +NR           QGSA R  E V +  Q   GT +       ++DAA  TSG 
Sbjct: 406 AIEALVNRF----------QGSAERMVEAVSSAAQQLQGTASA------MSDAASDTSGR 449

Query: 390 AHEVFAAS-------GRMAAEADRLTREVQHFLDEMHRVA 422
           A  V  A+         +AA A+ LT  +Q    ++HR A
Sbjct: 450 ATTVAGATELASANVQTVAAAAEELTSSIQEIGRQVHRSA 489