Pairwise Alignments

Query, 684 a.a., Ion-translocating oxidoreductase complex subunit B from Azospirillum sp. SherDot2

Subject, 181 a.a., Ferredoxin-type protein NapF from Azospirillum sp. SherDot2

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 24/48 (50%), Positives = 26/48 (54%), Gaps = 5/48 (10%)

Query: 287 CTRCLDVCPTGAI----TPNG-DHVAIDPHVCAGCGSCAAVCPTGAAT 329
           C  C D CP GAI     P G  H  ID   C GCG+C A CP+GA T
Sbjct: 116 CRSCQDACPEGAIRFQPAPGGAAHARIDEAACTGCGACVAACPSGAVT 163



 Score = 43.5 bits (101), Expect = 8e-09
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 505 PLPPGAPFGRVSVDVEGCTLCLSCVGACPTGAL-LDNADKPMLSFAQDACVQCGLCKTTC 563
           P P   P+ R       CT C +C GACP   L   +   P + FA+  C  CG C   C
Sbjct: 27  PPPIHPPWSRPDYFTALCTRCGACAGACPEAILRAGDGGYPEVDFARGECSFCGACAEAC 86

Query: 564 PEKV 567
            E +
Sbjct: 87  TEPI 90



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 485 VTMLALRHLHKAAP-APVEVLPLPPGAPFGRVSVDVEGCTLCLSCVGACPTGAL 537
           V  +  R    A P   +   P P GA   R+  D   CT C +CV ACP+GA+
Sbjct: 111 VQRVVCRSCQDACPEGAIRFQPAPGGAAHARI--DEAACTGCGACVAACPSGAV 162



 Score = 34.7 bits (78), Expect = 4e-06
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 524 LCLSCVGACPTGALLDNADKPMLSFA---QDACVQCGLCKTTCPEKVISL 570
           +C SC  ACP GA+         + A   + AC  CG C   CP   ++L
Sbjct: 115 VCRSCQDACPEGAIRFQPAPGGAAHARIDEAACTGCGACVAACPSGAVTL 164



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 7/34 (20%)

Query: 553 CVQCGLCKTTCPEKVISL----VPEIDFRDRARG 582
           C +CG C   CPE ++       PE+DF   ARG
Sbjct: 44  CTRCGACAGACPEAILRAGDGGYPEVDF---ARG 74



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)

Query: 278 AHSRSRK---TGCTRCLDVCPTGAIT 300
           AH+R  +   TGC  C+  CP+GA+T
Sbjct: 138 AHARIDEAACTGCGACVAACPSGAVT 163