Pairwise Alignments
Query, 881 a.a., Beta-barrel assembly-enhancing protease from Azospirillum sp. SherDot2
Subject, 2017 a.a., Lipopolysaccharide assembly protein B from Azospirillum sp. SherDot2
Score = 143 bits (361), Expect = 9e-38
Identities = 132/460 (28%), Positives = 186/460 (40%), Gaps = 47/460 (10%)
Query: 13 AGRLEEARARYLDVLRAEPRNPAALHRLGVVELRLGNPRDAVVLFQKSLAIAKDL-EVYL 71
AGRL EA A Y +L +P + ALH ++ + G +A+ +LA+ Y
Sbjct: 16 AGRLAEALALYRRILTDDPAHADALHLSAIIAHQTGRTAEALANLGAALAVQPGFATAYN 75
Query: 72 DFGAAMAGMARWDAAATVYAAALRVAPASADAHYGLAMALHRQGRPQDAEPHYRKVLAAF 131
G +A + + A + Y A+R +A+ A L R GR +A Y + L
Sbjct: 76 SLGNVLADLGMLEEALSAYVVAIRQNDRYVEAYNNRATVLQRLGRRNEAAEAYARALTMG 135
Query: 132 SHLGEVHNNLGVALQDLGRFAEAAAAHREAARIDPTDAASWSKLGVALHAIGQGAEAEAA 191
N GV ++LG+ + AA A + DP+ +A+W L + L +G +AEA
Sbjct: 136 PDNLTARFNYGVLQRELGQISPAANAFYAVVQADPSHSAAWRHLAICLRNLGH-PDAEAC 194
Query: 192 FRKALGLAPQDADCWHNLSGLLDADGRPAEALAAGRLAVALDPGSARNWLALGNAAGAAR 251
R+AL AP D D L LL++ G A AVA PG A+ + G A R
Sbjct: 195 LRRALQDAPGDKDLSLELGALLNSRGDHEAACGVLAAAVAAHPGIAQLHFSYGTALQGTR 254
Query: 252 SLEEAWRATSAAARLEPSSPAARNNLASALQELGRW------------------------ 287
L EA A EP+ A NNL AL ELG
Sbjct: 255 RLREAVVQFRLALDREPAMQGACNNLGVALLELGEMGPATLVLSRAVALSPGDAMVVNNH 314
Query: 288 ---------REAVAE-----YRAALELQPDFPVAEINLAQALSGLREADGALAVLRALLA 333
EA +E YR AL L+PD+ A +NLA RE A + R
Sbjct: 315 GTSLENRYDLEADSERPARWYRRALRLRPDYGKALVNLAGIHILRRELHHAERLYRRAAV 374
Query: 334 RQPANGEAWRRLGSVLAEAVRPDAAVAVLRKAVALAPGEPDAQADLAMAAAMAGWSTQSA 393
P + E + LG +L + A + R+A+A+ G P A + G ++
Sbjct: 375 ADPRSVETFVNLGGLLLDRDDLSQAGRMYRRALAIDAGSPSALTGYGLVLQRLGRIGEAE 434
Query: 394 DACRRVLRLVPGHAAALGQL------VHQQRLLCD-WRDL 426
A RR L + HA A G L HQ + W DL
Sbjct: 435 AAHRRALEIDGRHAEAAGNLGMMLWQCHQDDTAAEPWMDL 474
Score = 119 bits (297), Expect = 2e-30
Identities = 88/231 (38%), Positives = 113/231 (48%), Gaps = 1/231 (0%)
Query: 8 VAAENAGRLEEARARYLDVLRAEPRNPAALHRLGVVELRLGNPRDAVVLFQKSLAIAKDL 67
VAA +G +EA Y VL + PR+P ALH G++ + G ++A A +
Sbjct: 1448 VAAHRSGAHDEATPLYERVLASRPRDPVALHLSGLLAHQSGASARGEGRIAAAVAEAPEY 1507
Query: 68 EV-YLDFGAAMAGMARWDAAATVYAAALRVAPASADAHYGLAMALHRQGRPQDAEPHYRK 126
++ G + AA + AL V P SA A L AL R A +RK
Sbjct: 1508 ATAHISLGNVRLALGMAGPAAASFRTALAVQPDSAAALTNLGNALDALERSAAAAGLHRK 1567
Query: 127 VLAAFSHLGEVHNNLGVALQDLGRFAEAAAAHREAARIDPTDAASWSKLGVALHAIGQGA 186
+AA L E H+NLGVAL LGR+AEA AH +A R P A W L VAL +G+
Sbjct: 1568 AVAADPDLAEAHDNLGVALARLGRWAEAERAHAQALRRAPGLEAGWMNLSVALRRLGRLD 1627
Query: 187 EAEAAFRKALGLAPQDADCWHNLSGLLDADGRPAEALAAGRLAVALDPGSA 237
AE A R+AL LAP AD N LL G PA A A+A++PG A
Sbjct: 1628 AAERAGRRALALAPALADAMANRGRLLRELGDPAAAAPWCARALAVEPGHA 1678
Score = 107 bits (268), Expect = 6e-27
Identities = 99/328 (30%), Positives = 143/328 (43%), Gaps = 10/328 (3%)
Query: 4 FARGVAAENAGRLEEARARYLDVLRAEPRNPAALHRLGVVELRLGNPRDAVVLFQKSLAI 63
F GV G++ A + V++A+P + AA L + LG+P DA +++L
Sbjct: 143 FNYGVLQRELGQISPAANAFYAVVQADPSHSAAWRHLAICLRNLGHP-DAEACLRRALQD 201
Query: 64 AK-DLEVYLDFGAAMAGMARWDAAATVYAAALRVAPASADAHYGLAMALHRQGRPQDAEP 122
A D ++ L+ GA + +AA V AAA+ P A H+ AL R ++A
Sbjct: 202 APGDKDLSLELGALLNSRGDHEAACGVLAAAVAAHPGIAQLHFSYGTALQGTRRLREAVV 261
Query: 123 HYRKVLAAFSHLGEVHNNLGVALQDLGRFAEAAAAHREAARIDPTDAASWSKLGVAL--- 179
+R L + NNLGVAL +LG A A + P DA + G +L
Sbjct: 262 QFRLALDREPAMQGACNNLGVALLELGEMGPATLVLSRAVALSPGDAMVVNNHGTSLENR 321
Query: 180 HAIGQGAEAEAA-FRKALGLAPQDADCWHNLSG--LLDADGRPAEALAAGRLAVALDPGS 236
+ + +E A +R+AL L P NL+G +L + AE L R A DP S
Sbjct: 322 YDLEADSERPARWYRRALRLRPDYGKALVNLAGIHILRRELHHAERLY--RRAAVADPRS 379
Query: 237 ARNWLALGNAAGAARSLEEAWRATSAAARLEPSSPAARNNLASALQELGRWREAVAEYRA 296
++ LG L +A R A ++ SP+A LQ LGR EA A +R
Sbjct: 380 VETFVNLGGLLLDRDDLSQAGRMYRRALAIDAGSPSALTGYGLVLQRLGRIGEAEAAHRR 439
Query: 297 ALELQPDFPVAEINLAQALSGLREADGA 324
ALE+ A NL L + D A
Sbjct: 440 ALEIDGRHAEAAGNLGMMLWQCHQDDTA 467
Score = 101 bits (252), Expect = 4e-25
Identities = 74/201 (36%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 179 LHAIGQGAEAEAAFRKALGLAPQDADCWHNLSGLLDADGRPAEALAAGRLAVALDPGSAR 238
LH G+ AEA A +R+ L P AD H + + GR AEALA A+A+ PG A
Sbjct: 13 LHRAGRLAEALALYRRILTDDPAHADALHLSAIIAHQTGRTAEALANLGAALAVQPGFAT 72
Query: 239 NWLALGNAAGAARSLEEAWRATSAAARLEPSSPAARNNLASALQELGRWREAVAEYRAAL 298
+ +LGN LEEA A A R A NN A+ LQ LGR EA Y AL
Sbjct: 73 AYNSLGNVLADLGMLEEALSAYVVAIRQNDRYVEAYNNRATVLQRLGRRNEAAEAYARAL 132
Query: 299 ELQPDFPVAEINLAQALSGLREADGALAVLRALLARQPANGEAWRRLGSVLAEAVRPDAA 358
+ PD A N L + A A++ P++ AWR L L PDA
Sbjct: 133 TMGPDNLTARFNYGVLQRELGQISPAANAFYAVVQADPSHSAAWRHLAICLRNLGHPDAE 192
Query: 359 VAVLRKAVALAPGEPDAQADL 379
A LR+A+ APG+ D +L
Sbjct: 193 -ACLRRALQDAPGDKDLSLEL 212
Score = 99.0 bits (245), Expect = 3e-24
Identities = 91/253 (35%), Positives = 114/253 (45%), Gaps = 7/253 (2%)
Query: 160 EAARIDPTDAASWSKLGVALHAIGQGAEAEAAFRKALGLAPQDADCWHNLSGLLDADGRP 219
+AA DP D +L VA H G EA + + L P+D H LSGLL A
Sbjct: 1432 DAADPDP-DPDRLLELAVAAHRSGAHDEATPLYERVLASRPRDPVALH-LSGLL-AHQSG 1488
Query: 220 AEALAAGRLAVALD--PGSARNWLALGNAAGAARSLEEAWRATSAAARLEPSSPAARNNL 277
A A GR+A A+ P A ++LGN A A + A ++P S AA NL
Sbjct: 1489 ASARGEGRIAAAVAEAPEYATAHISLGNVRLALGMAGPAAASFRTALAVQPDSAAALTNL 1548
Query: 278 ASALQELGRWREAVAEYRAALELQPDFPVAEINLAQALSGL-READGALAVLRALLARQP 336
+AL L R A +R A+ PD A NL AL+ L R A+ A +AL R P
Sbjct: 1549 GNALDALERSAAAAGLHRKAVAADPDLAEAHDNLGVALARLGRWAEAERAHAQAL-RRAP 1607
Query: 337 ANGEAWRRLGSVLAEAVRPDAAVAVLRKAVALAPGEPDAQADLAMAAAMAGWSTQSADAC 396
W L L R DAA R+A+ALAP DA A+ G +A C
Sbjct: 1608 GLEAGWMNLSVALRRLGRLDAAERAGRRALALAPALADAMANRGRLLRELGDPAAAAPWC 1667
Query: 397 RRVLRLVPGHAAA 409
R L + PGHAAA
Sbjct: 1668 ARALAVEPGHAAA 1680
Score = 98.2 bits (243), Expect = 4e-24
Identities = 79/247 (31%), Positives = 107/247 (43%), Gaps = 4/247 (1%)
Query: 95 RVAPASADAHYGLAMALHRQGRPQDAEPHYRKVLAAFSHLGEVHNNLGVALQDLGRFAEA 154
RV S H G +A R+G ++A+ + AA H H L Q LG+ A
Sbjct: 850 RVPAHSVALHLGGVLA-KRRGSLEEAQDLLVRASAADPHNASAHAALCEVRQGLGQIEAA 908
Query: 155 AAAHREAARIDPTDAASWSKLGVALHAIGQGAEAEAAFRKALGLAPQDADCWHNLSGLLD 214
A R + P A W L GQ A A +A +AL L P A +L+ L D
Sbjct: 909 DRASRACVAVQPDSAGHWVNRTALLRRTGQVAAARSAIIRALHLRPDLAPALGHLAELAD 968
Query: 215 ADGRPAEALAAGRLAVALDPGSARNWLALGNAAGAARSLEEAWRATSAAARLEPSSPAAR 274
P +A+ R+AV+L PG+A LG A +EA R A R +P A
Sbjct: 969 T---PGDAVRVHRIAVSLTPGTADVLSNLGGALHKLLRFDEAARLLDRATRCDPGLAVAW 1025
Query: 275 NNLASALQELGRWREAVAEYRAALELQPDFPVAEINLAQALSGLREADGALAVLRALLAR 334
N +AL+ +G EA + +R A+EL P A NLA L + ALA A L
Sbjct: 1026 TNRGNALEAMGLIAEAESCHRTAIELAPSLADAHGNLAYLLKRHGRQEEALAAFDAALEA 1085
Query: 335 QPANGEA 341
P + +A
Sbjct: 1086 DPKHAQA 1092
Score = 95.5 bits (236), Expect = 3e-23
Identities = 97/349 (27%), Positives = 136/349 (38%), Gaps = 9/349 (2%)
Query: 71 LDFGAAMAGMARWDAAATVYAAALRVAPASADAHYGLAMALHRQGRPQDAEPHYRKVLAA 130
LD + R A +Y L PA ADA + A+ H+ GR +A + LA
Sbjct: 7 LDAALPLHRAGRLAEALALYRRILTDDPAHADALHLSAIIAHQTGRTAEALANLGAALAV 66
Query: 131 FSHLGEVHNNLGVALQDLGRFAEAAAAHREAARIDPTDAASWSKLGVALHAIGQGAEAEA 190
+N+LG L DLG EA +A+ A R + +++ L +G+ EA
Sbjct: 67 QPGFATAYNSLGNVLADLGMLEEALSAYVVAIRQNDRYVEAYNNRATVLQRLGRRNEAAE 126
Query: 191 AFRKALGLAPQDADCWHNLSGLLDADGRPAEALAAGRLAVALDPGSARNWLALGNAAGAA 250
A+ +AL + P + N L G+ + A A V DP + W L A
Sbjct: 127 AYARALTMGPDNLTARFNYGVLQRELGQISPAANAFYAVVQADPSHSAAWRHL---AICL 183
Query: 251 RSL--EEAWRATSAAARLEPSSPAARNNLASALQELGRWREAVAEYRAALELQPDFPVAE 308
R+L +A A + P L + L G A AA+ P
Sbjct: 184 RNLGHPDAEACLRRALQDAPGDKDLSLELGALLNSRGDHEAACGVLAAAVAAHPGIAQLH 243
Query: 309 INLAQALSGLREADGALAVLRALLARQPANGEAWRRLGSVLAEAVRPDAAVAVLRKAVAL 368
+ AL G R A+ R L R+PA A LG L E A VL +AVAL
Sbjct: 244 FSYGTALQGTRRLREAVVQFRLALDREPAMQGACNNLGVALLELGEMGPATLVLSRAVAL 303
Query: 369 APGEP----DAQADLAMAAAMAGWSTQSADACRRVLRLVPGHAAALGQL 413
+PG+ + L + S + A RR LRL P + AL L
Sbjct: 304 SPGDAMVVNNHGTSLENRYDLEADSERPARWYRRALRLRPDYGKALVNL 352
Score = 95.5 bits (236), Expect = 3e-23
Identities = 94/298 (31%), Positives = 117/298 (39%), Gaps = 51/298 (17%)
Query: 107 LAMALHRQGRPQDAEPHYRKVLAAFS------HL-GEVHNNLGVALQDLGRFAEAAAAHR 159
LA+A HR G +A P Y +VLA+ HL G + + G + + GR A A A
Sbjct: 1446 LAVAAHRSGAHDEATPLYERVLASRPRDPVALHLSGLLAHQSGASARGEGRIAAAVA--- 1502
Query: 160 EAARIDPTDAASWSKLGVALHAIGQGAEAEAAFRKALGLAPQDADCWHNLSGLLDADGRP 219
EA P A + LG A+G A A+FR AL + P A NL LDA R
Sbjct: 1503 EA----PEYATAHISLGNVRLALGMAGPAAASFRTALAVQPDSAAALTNLGNALDALERS 1558
Query: 220 AEALAAGRLAVALDPGSARNWLALGNAAGAARSLEEAWRATSAAARLEPSSPAARNNLAS 279
A A R AVA DP A A +NL
Sbjct: 1559 AAAAGLHRKAVAADPDLAE----------------------------------AHDNLGV 1584
Query: 280 ALQELGRWREAVAEYRAALELQPDFPVAEINLAQALSGLREADGALAVLRALLARQPANG 339
AL LGRW EA + AL P +NL+ AL L D A R LA PA
Sbjct: 1585 ALARLGRWAEAERAHAQALRRAPGLEAGWMNLSVALRRLGRLDAAERAGRRALALAPALA 1644
Query: 340 EAWRRLGSVLAEAVRPDAAVAVLRKAVALAPGEPDAQAD---LAMAAAMAGWSTQSAD 394
+A G +L E P AA +A+A+ PG A + L + A W D
Sbjct: 1645 DAMANRGRLLRELGDPAAAAPWCARALAVEPGHAAAAFNGGLLELTAGRLAWGWDGYD 1702
Score = 94.4 bits (233), Expect = 6e-23
Identities = 86/257 (33%), Positives = 113/257 (43%), Gaps = 7/257 (2%)
Query: 7 GVAAENAGRLEEARARYLDVLRAEPRNPAALHRLGVVELRLGNPRDAVVLFQKSLAIAKD 66
GV A+ G LEEA+ + A+P N +A L V LG A + +A+ D
Sbjct: 862 GVLAKRRGSLEEAQDLLVRASAADPHNASAHAALCEVRQGLGQIEAADRASRACVAVQPD 921
Query: 67 LEVYLDFGAAMAGMARWDAAATVYAAALRVAPASADAHYGLAMALHRQGRPQDAEPHYRK 126
+ A+ + R A +A +R D L P DA +R
Sbjct: 922 SAGHWVNRTAL--LRRTGQVAAARSAIIRALHLRPDLAPALGHLAELADTPGDAVRVHRI 979
Query: 127 VLAAFSHLGEVHNNLGVALQDLGRFAEAAAAHREAARIDPTDAASWSKLGVALHAIGQGA 186
++ +V +NLG AL L RF EAA A R DP A +W+ G AL A+G A
Sbjct: 980 AVSLTPGTADVLSNLGGALHKLLRFDEAARLLDRATRCDPGLAVAWTNRGNALEAMGLIA 1039
Query: 187 EAEAAFRKALGLAPQDADCWHNLSGLLDADGRPAEALAAGRLAVALDPGSA-----RNWL 241
EAE+ R A+ LAP AD NL+ LL GR EALAA A+ DP A R+ L
Sbjct: 1040 EAESCHRTAIELAPSLADAHGNLAYLLKRHGRQEEALAAFDAALEADPKHAQARYNRSLL 1099
Query: 242 ALGNAAGAARSLEEAWR 258
L A A + WR
Sbjct: 1100 LLETGALRAGWADHDWR 1116
Score = 68.6 bits (166), Expect = 4e-15
Identities = 86/319 (26%), Positives = 125/319 (39%), Gaps = 27/319 (8%)
Query: 149 GRFAEAAAAHREAARIDPTDAASWSKLGVALHAIGQGAEAEAAFRKALGLAPQDADCWHN 208
GR AA AR DP D ++ VA + G A AE+ R+ L P + H
Sbjct: 802 GRQQAQQAATIAPARPDPDDDRKMAE-AVAHYRTGDFALAESVVRQLLDRVPAHSVALHL 860
Query: 209 LSGLLDADGRPAEALAAGRLAVALDPGSARNWLALGNAAGAARSLEEAWRATSAAARLEP 268
L G EA A A DP +A AL +E A RA+ A ++P
Sbjct: 861 GGVLAKRRGSLEEAQDLLVRASAADPHNASAHAALCEVRQGLGQIEAADRASRACVAVQP 920
Query: 269 SSPAARNNLASALQELGRWREAVAEYRAALELQPDFPVAEINLAQALSGLREADG-ALAV 327
S N + L+ G+ A + AL L+PD A +LA+ L + G A+ V
Sbjct: 921 DSAGHWVNRTALLRRTGQVAAARSAIIRALHLRPDLAPALGHLAE----LADTPGDAVRV 976
Query: 328 LRALLARQPANGEAWRRLGSVLAEAVRPDAAVAVLRKAVALAPGEPDAQADLAMAAAMAG 387
R ++ P + LG L + +R D A +L +A PG A + A G
Sbjct: 977 HRIAVSLTPGTADVLSNLGGALHKLLRFDEAARLLDRATRCDPGLAVAWTNRGNALEAMG 1036
Query: 388 WSTQSADACRRVLRLVPGHAAALGQLVHQQRLLCDWRDLDGLEVELLRQVRAGAEGVSPF 447
++ R + L P A A G L + LL++ E ++ F
Sbjct: 1037 LIAEAESCHRTAIELAPSLADAHGNLAY-----------------LLKRHGRQEEALAAF 1079
Query: 448 DVLSCASTLADQQSAAARW 466
D A+ AD + A AR+
Sbjct: 1080 D----AALEADPKHAQARY 1094
Score = 67.4 bits (163), Expect = 8e-15
Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 14 GRLEEARARYLDVLRAEPRNPAALHRLGVVELRLGNPRDAVVLFQKSLAIAKDL-EVYLD 72
G A A + L +P + AAL LG L A L +K++A DL E + +
Sbjct: 1522 GMAGPAAASFRTALAVQPDSAAALTNLGNALDALERSAAAAGLHRKAVAADPDLAEAHDN 1581
Query: 73 FGAAMAGMARWDAAATVYAAALRVAPASADAHYGLAMALHRQGRPQDAEPHYRKVLAAFS 132
G A+A + RW A +A ALR AP L++AL R GR AE R+ LA
Sbjct: 1582 LGVALARLGRWAEAERAHAQALRRAPGLEAGWMNLSVALRRLGRLDAAERAGRRALALAP 1641
Query: 133 HLGEVHNNLGVALQDLGRFAEAAAAHREAARIDPTDAAS 171
L + N G L++LG A AA A ++P AA+
Sbjct: 1642 ALADAMANRGRLLRELGDPAAAAPWCARALAVEPGHAAA 1680
Score = 43.9 bits (102), Expect = 1e-07
Identities = 43/147 (29%), Positives = 58/147 (39%), Gaps = 1/147 (0%)
Query: 7 GVAAENAGRLEEARARYLDVLRAEPRNPAALHRLGVVELRLGNPRDAVVLFQKSLAIAKD 66
G A + R A + + A+P A LGV RLG +A ++L A
Sbjct: 1549 GNALDALERSAAAAGLHRKAVAADPDLAEAHDNLGVALARLGRWAEAERAHAQALRRAPG 1608
Query: 67 LEV-YLDFGAAMAGMARWDAAATVYAAALRVAPASADAHYGLAMALHRQGRPQDAEPHYR 125
LE +++ A+ + R DAA AL +APA ADA L G P A P
Sbjct: 1609 LEAGWMNLSVALRRLGRLDAAERAGRRALALAPALADAMANRGRLLRELGDPAAAAPWCA 1668
Query: 126 KVLAAFSHLGEVHNNLGVALQDLGRFA 152
+ LA N G+ GR A
Sbjct: 1669 RALAVEPGHAAAAFNGGLLELTAGRLA 1695