Pairwise Alignments

Query, 536 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 870 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  169 bits (428), Expect = 4e-46
 Identities = 105/270 (38%), Positives = 155/270 (57%), Gaps = 14/270 (5%)

Query: 249 PGGVLVHYT----DVTTLKLNEERLRIREAEARTARAEAESASRAKSAFLAQMSHELRTP 304
           P G ++HY     D+T  K  E+ L         A   AE A+RAK+ FL+ MSHELRTP
Sbjct: 601 PDGAILHYLAVKEDITARKAAEDALV-------AAMQAAEDANRAKTVFLSHMSHELRTP 653

Query: 305 LNAVLGFSEMLLSEAFGPLGNPRYRSYAGDIRDAGTHLLALIDDILELSRLDGGGMPMAE 364
           L AVLG++EML S   GPL + ++  +   I D+G HLL++ID++L++SR++ G   +A 
Sbjct: 654 LTAVLGYTEMLESGMAGPLPS-QHADFVAAISDSGRHLLSIIDEVLDISRIELGSYRIAT 712

Query: 365 EGVDLDMLSLRVVSALQEVAKEGDVHLRREVPADLPLLQGDAQALTQMLTNLLSNAVTHT 424
              DL  ++   V  L+      D+ L  E    +PL+  D++A+ Q+L NLL NAV +T
Sbjct: 713 GPTDLRSIAQECVGMLRPQCVAKDIQLDLEEGGAMPLVT-DSRAVRQVLINLLGNAVKYT 771

Query: 425 RPGGEVMLTAHLMPDGGIGLMVADTGVGIPSAELPRILHPFEPPDSTIARNSRGTGLGLP 484
             GG + +         + ++VADTG GI + +L  +  PF+  D   A  +RG GLGL 
Sbjct: 772 EAGGRISVGL-TRAGQTLRVVVADTGCGIATDKLAHVFEPFQRVDPLRADPARGVGLGLA 830

Query: 485 IVKRLVEMHGGRMELTSQPGVGTAVVLVFP 514
           I +R+VE+  G + + S+PG GTAV L  P
Sbjct: 831 ICRRIVELLHGDIAIQSEPGRGTAVTLTLP 860



 Score = 35.4 bits (80), Expect = 9e-06
 Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 4/127 (3%)

Query: 146 AESLTAALEHSAESFALFDHEDRLVHANGRLKRDLPDVADRLVPGVSFEELANRFALTDP 205
           + +L   L++ A+  +++D + RLV  N R    L    D   PG + E+     A    
Sbjct: 380 SRTLETILDNIAQGISVYDDDLRLVACNHRFGELLRLPPDMTRPGTALEDYLRFNARRGE 439

Query: 206 RLTTDEERRAWVAVRLERHRRLEP-PVVVPLPDGRWLLSREHAVPGGVLV-HYTDVTTLK 263
               D E  A VA R++  R  +P        DG  L    + +PGG  V  +TD+T  +
Sbjct: 440 YGPGDPE--AHVAERMDLARNFQPHRFQRQRADGTALEVIGNPLPGGGFVATHTDITEAR 497

Query: 264 LNEERLR 270
             EE LR
Sbjct: 498 RAEEALR 504