Pairwise Alignments

Query, 451 a.a., sn-glycerol-3-phosphate-binding periplasmic protein UgpB from Azospirillum sp. SherDot2

Subject, 439 a.a., sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB from Dickeya dadantii 3937

 Score =  414 bits (1065), Expect = e-120
 Identities = 205/439 (46%), Positives = 288/439 (65%), Gaps = 5/439 (1%)

Query: 13  AAATSALLFAAALPGSALAQQKTVIDFWHGLPQPLGGQLEQIAKDFNDSQQAVQVNASYK 72
           A   +A +   AL  SA AQ  T I FWH +   LG  +  +A  FN +   V++   YK
Sbjct: 5   AIRKTAAVVIMALAASAQAQAVTEIPFWHSMEGELGKTVNSLADRFNQTHSDVKIVPVYK 64

Query: 73  GSYPETMQAAIAAFRAGNAPHIVQMFEVGTATMMAAGPAVKPVYQLMQETGASFDADAYI 132
           G+Y +++ A IAAFR+ NAP I+Q++EVGTATMMA+  A+KPVYQ+ ++ G  +D   ++
Sbjct: 65  GNYEQSLAAGIAAFRSDNAPAILQVYEVGTATMMAS-KAIKPVYQVFKDAGVPYDEKIFV 123

Query: 133 PAVKGYYS-SKDGKMMALPFNSSSTIMFYNKDAFQKAGLDPNKPPATWPEMIEATKKLKA 191
           P V GYYS +K G +++ PFNSS+ +++YNKDAF+KAGLDP +PP TW +M E T KL+A
Sbjct: 124 PTVSGYYSDAKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQQMAEYTAKLRA 183

Query: 192 SGSTCPLTTAWPVWAQFEQLGAIHNTPFASQGNGFGGLNAELKIDAPLYVKHVQTLIDMQ 251
           SG  C   + W  W Q E   A H  P A++ NGF GL+A L+ + P+ VKH+Q L DM 
Sbjct: 184 SGMKCGYASGWQGWIQIENFSAWHGLPIATKNNGFDGLDAVLEFNKPVQVKHIQMLEDMN 243

Query: 252 KDGLFKYGGRDNKPDALFPSGECAMIHASSGLRSRILKEATFAWGAAPLPYWPEFAKDGP 311
           K G F Y GR ++P   F +G+CAM  ASSG  + I + A F +G A +PY  +  K  P
Sbjct: 244 KKGDFTYYGRKDEPTEKFYNGDCAMTTASSGSLANIRQYAKFNYGVAMMPYDAD-VKGAP 302

Query: 312 KNSIIGGAAFWVMTSPKRTPAEYKAVSQFFTYLAKPEVDAKWHMDTGYVPVTMKGFELAK 371
           +N+IIGGA+ WVM    +  A YK V++F  +L+ PE+ A+WH  TGY+P+T   +EL K
Sbjct: 303 QNAIIGGASLWVMNG--KDAATYKGVAEFMQFLSTPEIAAEWHQKTGYLPITTAAYELTK 360

Query: 372 AQGYYEKNPGADVPAAQLTRTPTTENSMGLRLGNLPEIRNIIQEELEKAFQGQQDAKQAL 431
            QG+Y+KNPGAD+   Q+        + GLRLGN+P+IR I+ EELE  + G++  +QAL
Sbjct: 361 QQGFYDKNPGADIATRQMLNKEPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQAL 420

Query: 432 DASIKRGNTVLRNFERANK 450
           DA+++RGN +LR FE+ANK
Sbjct: 421 DAAVERGNALLRRFEQANK 439