Pairwise Alignments

Query, 638 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 589 a.a., PAS domain-containing sensor histidine kinase from Bosea sp. OAE506

 Score =  184 bits (468), Expect = 7e-51
 Identities = 127/395 (32%), Positives = 200/395 (50%), Gaps = 23/395 (5%)

Query: 254 RLSEARNEAVLDTAADAILTVDEAGVLLSFNRAAEAMFGVAAGDLLWRPLDRLIPLAD-- 311
           R S+ R + +LD   D +   D  G ++  N+AA  + G    DL  R L   + +AD  
Sbjct: 184 RASDQRAQLLLDHVGDLVTWHDAGGAVVYANQAARTLAGADPRDLHGRGLLDRVHVADRP 243

Query: 312 LREEGGIRLEFAPGQTTALVAR--DRAAEAERADGIRFPVELSVSASEVEG---RRVYTA 366
           L  +         G+ TA          E+ER   +   +E+     E  G         
Sbjct: 244 LFLKALSDAAHGAGEATACFRTLFVPKGESERQHPVSLWLEMQAHRIETAGPGDSAAVVC 303

Query: 367 ILRDVTERRRAEAELLAAKEAAEAGNQAKSTFIATMSHELRTPLNAVIGFSQLLETQAGT 426
           ++RD+T RR  E E       A   +  K  F+AT+SHELRTPLNA+IGFS++L  +   
Sbjct: 304 VMRDITARRALEEEQARGHAEAVKASDVKGRFLATVSHELRTPLNAIIGFSEMLSDEGHA 363

Query: 427 AVAGGRQNDLVTDCVGAIRQAGEQLLAIIDDILDMARVDAGGFSLVEGSVNLSALIERVV 486
            +  G++ +        I  +G  LL +++ +LD++++++G  ++ +  ++LS +    +
Sbjct: 364 WLDAGKRLEYAR----IIHSSGHHLLDVVNTLLDISKIESGTMTIDQEPLDLSEMARDCL 419

Query: 487 ADLRFHATRQGVTVDVAADGDLPPIRGDDRRLGQALRNLLSNAIKFSHPGGAVSLSAGLA 546
           A +   A    + ++     DLP ++GD R L Q + NLLSNAIKF+ PGG V L+  + 
Sbjct: 420 ALMNLRADAGEIHLERVLGPDLPLVQGDRRALKQVMINLLSNAIKFTPPGGRVVLA--VV 477

Query: 547 ADG-WVELTVRDRGVGMRQEDVAQALTPFGQIDQTVTRRHEGIGLGLPLALRLVEAHGGT 605
            DG  ++L+V D G+G+   D+ +   PF Q   +  R +EG GLGL +   LV  HGG 
Sbjct: 478 RDGEMIDLSVSDTGIGIAAADLPRLGDPFFQAKGSYDRAYEGTGLGLSVVRGLVGLHGGR 537

Query: 606 LTLDSAPGQGCTATIRLP---------PSRIMTIA 631
           LT++SAPG G    +RLP         P+RI+T A
Sbjct: 538 LTIESAPGVGTRVCVRLPVAGVADAEQPARIVTFA 572



 Score = 42.0 bits (97), Expect = 8e-08
 Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 18/170 (10%)

Query: 110 AIGGLVLNIRDISDHIALSERLRASEARYRTLAEAVPVGILQADSAGQVQFANARLAGIT 169
           AIG L     ++ +H       RAS+ R + L + V   +   D+ G V +AN     + 
Sbjct: 169 AIGFLHRRREELREH-------RASDQRAQLLLDHVGDLVTWHDAGGAVVYANQAARTLA 221

Query: 170 GLEPDRLLGRGWLDAVHPEDRE---RVAADWRLDSGCDAAATDFRFHDPDGTGADR---- 222
           G +P  L GRG LD VH  DR    +  +D    +G +A A       P G    +    
Sbjct: 222 GADPRDLHGRGLLDRVHVADRPLFLKALSDAAHGAG-EATACFRTLFVPKGESERQHPVS 280

Query: 223 ---RVLCQRIRLEDGGTIATITDVSEYVLTANALRLSEARNEAVLDTAAD 269
               +   RI     G  A +  V   +    AL   +AR  A    A+D
Sbjct: 281 LWLEMQAHRIETAGPGDSAAVVCVMRDITARRALEEEQARGHAEAVKASD 330