Pairwise Alignments

Query, 305 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 314 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens GW456-L13

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 20/293 (6%)

Query: 17  RIALIALLVGALGIAFAPIFVRLSEVGPVATGFWRTALAMPALGLWMAAESRQRDGRSSR 76
           ++A + ++ G   +A   +   LS   P+     R  LA  AL L++      R  R+  
Sbjct: 19  KLAAVTMVWGGTFVAGRYLAAGLS---PLLAASLRFLLASVALLLFI------RMARTPL 69

Query: 77  RPSSVSDYARLSLAGLF--FAGDLAIWHTSIRYTSVANSTLLANFAPLYVAPAAWFLFKE 134
              S   + +LSL G F  F  +L  ++  + Y + + ++L+    P  +  A+W LFKE
Sbjct: 70  VRPSPRQWLQLSLLGFFGIFFYNLCFFY-GLHYINASRASLIVALNPAVIGLASWLLFKE 128

Query: 135 RITRRFVMGMLLALAGA-IVLMGESFQL---DADHLFGDGLALLTAAFYAGYILSVGRLR 190
           R+ R  V+G+ + +AGA +V++    QL    AD   GD L       +  Y L    L 
Sbjct: 129 RLNRAKVVGIAICVAGASMVIVSRDPQLLAGGADVWLGDLLIFGCVLGWGVYSLFSKELN 188

Query: 191 AEFSTATIMTWSGAISALVLLPIGLYDGEAMLPA----SASGWAVLAGLALFSHACGQSL 246
                   +T+S  +  ++L    +  GE  + A     A  W  L  L +   A     
Sbjct: 189 HTLGPVQTVTYSILLGTVMLWMTCIVRGEVSVAAIAQLGAQQWLSLLYLGVLGSALAYIG 248

Query: 247 IAYALAHLPASFSSVSLLLQPAAAAILAWILLSEPLGPLQALGAAVILVGILL 299
               +  + A+ S V + L P  A IL  +LL EPL     LG  +IL GI L
Sbjct: 249 YYDGIRKIGATRSGVFIALNPLTAVILGALLLDEPLTLAMCLGGGLILAGIFL 301