Pairwise Alignments

Query, 386 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 257 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

 Score =  143 bits (361), Expect = 5e-39
 Identities = 86/244 (35%), Positives = 137/244 (56%), Gaps = 2/244 (0%)

Query: 141 PGLFGLGLLVGWEVLVRGFQVPAILLPPPSRIAAALAANAPVLWDDFRQTVLTSVLRGYI 200
           P L  L LLV W++ +R F++PA L+PPP  +   L A  P L  +  +T L + L G+ 
Sbjct: 13  PFLLILMLLVLWDLAIRLFKIPAYLIPPPWEVVKQLVAEWPHLLAESWKTTLAT-LGGFG 71

Query: 201 MGCGAGFLVAILADRVPFLARGLLPLGNLASAIPVVGIAPIMVMWFGFDWQSKAAVIVVM 260
           +    G  +A++      +   + PL   + +IP V IAP+ V+WFGF    K     ++
Sbjct: 72  LTILIGIPIAMVIAYSRVVESYVYPLLVFSQSIPKVAIAPLFVVWFGFGIFPKVISAFLL 131

Query: 261 TFFPMLINTLAGLGNSERIQLDLMRSYAAGYGRTLVKLRLPNALPFLFNGLKINSTLALI 320
            FFP++++T+ G  + E   LDL RS  A   +T  K+ LP ALP +F+GLK++ TLA++
Sbjct: 132 GFFPVVVSTVMGFKSVEPDMLDLSRSMGASRLQTFFKISLPQALPQIFSGLKVSVTLAVV 191

Query: 321 GAIVAEFFGTPVVGMGFRISTEVARMNLDIVWATIAVAALTGSGLYGALALLERATTAWH 380
           GA+V EF G+   G+G+ +       +L +++A + V +  G  L+ A+ L+ER    WH
Sbjct: 192 GAVVGEFVGSN-SGIGYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVDLVERVMIPWH 250

Query: 381 PSMR 384
            S R
Sbjct: 251 ASQR 254