Pairwise Alignments

Query, 287 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 273 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  100 bits (249), Expect = 4e-26
 Identities = 71/232 (30%), Positives = 120/232 (51%), Gaps = 20/232 (8%)

Query: 65  VVVELWNSLTGYAPTSPRNLLFHAWVTAEAALTGL-----------AMGLALGILLAAGI 113
           VVV L  SL  Y    P ++L   +  ++   TGL           A+ + LG+ ++  +
Sbjct: 37  VVVAL--SLPVYVLPGPLDVLKALYADSDLLFTGLLFTLKVTVLAFAVAVLLGVSISFLL 94

Query: 114 VYTRTLEASLLPWVIASQTIPILAIAPMIVVILGNIGLTGLLPKAVICMYLCFFPITVGM 173
             +R LE S++P+++  Q  PI+AIAP+I++ + N      +    I      FPI   M
Sbjct: 95  SQSRLLEKSVMPYMVILQVTPIVAIAPLIIIWVSNT----FVALVTIASITALFPIVSNM 150

Query: 174 VKGLRSADPLWLDLMRTYSASGLRAFWSLRLPASMPFLFASLKVSVAISVVGAIVGEL-- 231
             GLRS  P    L R Y AS  +    L+L A++P+ FA  ++S  ++++GA+V E   
Sbjct: 151 TLGLRSVAPNLQSLFRIYRASNWQTLTRLKLKAALPYFFAGARISSGLALIGAVVAEFVA 210

Query: 232 PTGG-QAGLGARLLSGSYYGQTVQIWAALIMASLLSVALIAVVRGLELVLLG 282
            TGG Q+GL   +L      +  +++A+L++ SL  +AL A++  +   +LG
Sbjct: 211 GTGGTQSGLAYIILESGVQLKVPRMFASLLLISLTGIALFALMVFISNRVLG 262